EST details — SGN-C179578

Search information 
Request: 179578Match: SGN-C179578
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179578Clone name: TUS-32-B24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179578 is on microarray TOM1 spot ID 1-1-1.2.1.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82433 [cLET-1-O19] Trace: SGN-T102421 EST: SGN-E292147 Direction: 5' Facility: TIGR
Clone: SGN-C82433 [cLET-1-O19] Trace: SGN-T102598 EST: SGN-E292324 Direction: 3' Facility: TIGR
Clone: SGN-C179578 [TUS-32-B24] Trace: SGN-T186289 EST: SGN-E372808 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372809Length: 717 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372809 [] (trimmed) AAAACCCTACAGCTCCCTCTTACGAAGCTTAGCTTCGAGTTTTTCTTCTCATCTTTTCGATAATGGCTTTACCAAACCAGCAAACTGTAGACTAT
CCAAGCTTCAAGCTTGTTATTGTGGGAGATGGAGGAACTGGCAAGACAACATTTGTCAAAAGGCATCTCACTGGTGAATTCGAGAAAAAATACGA
ACCCACTATTGGTGTGGAGGTTCATCCACTAGACTTCTTCACAAATTGTGGGAAGATTCGGTTTTATTGCTGGGATACAGCTGGACAAGAGAAGT
TTGGAGGTCTCAGAGATGGTTACTACATTCATGGGCAATGTGCAATTATCATGTTTGATGTTACAGCCCGTCTGACCTACAAGAATGTTCCTACA
TGGCATAGAGATCTTTGTAGGGTTTGTGAAAACATCCCCATTGTTCTCTGTGGAAACAAAGTTGATGTCAAGAACAGGCAGGTTAAGGCTAAGCA
AGTTACCTTCCACAGGAAGAAAAATTTGCAATACTATGAGATCTCAGCAAAGAGTAACTACAACTTTGAGAAGCCTTTTCTGTACCTTGCCAGAG
AGCTTGCTGGGGATGGTAATCTTCACTTTGTGGAGTCACCTGCACTTGCTCCCCCAGAAGTACACATCGACTTAGCTGCACAGGCACTGCATGAA
GAAGAGCTTCAACAAGCCGCCAATCAGCCACTTCCAGATGACGATGACGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372809] SGN-U580136 Tomato 200607 Build 2 82 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186290 [Download][View] Facility Assigned ID: FA0AAD20DA12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5