EST details — SGN-C180696

Search information 
Request: 180696Match: SGN-C180696
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C180696Clone name: TUS-35-A14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180696 is on microarray TOM1 spot ID 1-1-3.1.17.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C37445 [cLEG-42-B16] Trace: SGN-T72500 EST: SGN-E259739 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392271Length: 264 bp (853 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392271 [] (trimmed) ATTAAGTATTCATTGCTTTGTTCATAATTCTTTGCCCGGGTTTGGGTCGTTTATTTTACGCTACAACAAACAGACATTTATCCATGGGCCTTTTA
CACGTCACTTGATGTTCAAGTACTGAGATATGGATGCTGCATTAGGATCGAACTTCACATCCATATCAGAATACTATATGCTTCAGTAACAAAAA
TCATAAAACCCTGTACAGACTCGAACTGGCTTCTTAACTTCAGGGACAAATGCAATGGTCGGTGGGGGGGGGGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392271] SGN-U587901 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193597 [Download][View] Facility Assigned ID: FA0AAD23BA07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0475 Quality Trim Threshold: 14.5