EST details — SGN-C181325

Search information 
Request: 181325Match: SGN-C181325
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C181325Clone name: TUS-36-K19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181325 is on microarray TOM1 spot ID 1-1-6.3.14.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23864 [cLED-6-I6] Trace: SGN-T50142 EST: SGN-E233156 Direction: 5' Facility: TIGR
Clone: SGN-C181325 [TUS-36-K19] Trace: SGN-T187666 EST: SGN-E375108 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E375109Length: 597 bp (894 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E375109 [] (trimmed) GCACCAGGGAATCTGTTGCCTCTGATAGGTTTCTGTGCTGAAAAGCAAGAAAGACTTCTTGTTTACAAATACATGAGTAATGGAAGTCTTGATGA
ATGGCTGCACTCGAATGAAGTTAAGGCGAAAATTTTGGATTTCCCTCGGAGAGCTAAAATTGCTCTTGGGATAGCGAAAGGCCTGGCTTGGCTTC
ATCATGGTTACGAATTGCACGTTACACATGGAAGCATAAGCACACGATGTATCTTGTTAGATCAAAATCTTGAACCAAAAATAGCCAACTTTTGG
GAAGCAAAATTTTGGAGTAAGAATGATTCTGCATTAAGTTGGAGTCTTTTCCCAGTAGCTGAATATTCAGGTTTAGGCTCTTACAAGCAAGACAT
CTACTGTTTTGGTGTCGTGCTTCTCGAGCTGGTAACAGGGAAGGAACCACATGAACTGACCAGCTCAAGAAATCTATTCGATCACTCGCCTTGTC
TACTTGATGCAGATAGAGATTTGCTTGGGAAAGGAGCTGATGATTTAATCCTCCAATTTCTTGAATTGGCTTGTGACTGCGTCAAGTTCTTTCCT
AATGAAAGGCCAACAATGCTGGAAGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E375109] SGN-U575453 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187667 [Download][View] Facility Assigned ID: FA0AAD24AF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5