EST details — SGN-C181360
Search information |
Request: 181360 | Match: SGN-C181360 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C181360 | Clone name: TUS-36-M6 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181360 is on microarray TOM1 spot ID 1-1-3.1.15.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C15583 [cLED-13-F5] | Trace: SGN-T51707 | EST: SGN-E236429 | Direction: 5' | Facility: TIGR |
Clone: SGN-C181360 [TUS-36-M6] | Trace: SGN-T199222 | EST: SGN-E397896 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E392252 | Length: 313 bp (871 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E392252 [] (trimmed)
CCCTATCCCGGTATTTATATCAAATTAATTGTCATGCTTGGGAAATGTAAGGAACCTGAGAAAGCTCAATCTTTATTCGAGATGATGGTGGAGGA
AGGTTGTGTCTTGAATCAAAATTCTTACACTGCTCTTTTGTCCGCCTATAGCCGTAGTGTTCTCTTTCGCGACGCTTTTTCTATCCTGTAAGAGA
TGAAGAACATTCCGAACTGCCTCCCGGATGTCTTCACATATTCCATCCTGATAAAATCCAGCCTGCAGGTTTATGATTTCGACAACCTGCAAATT
CTGCTTTCCGACCTGGAATGTTTGGGGA
AGGTTGTGTCTTGAATCAAAATTCTTACACTGCTCTTTTGTCCGCCTATAGCCGTAGTGTTCTCTTTCGCGACGCTTTTTCTATCCTGTAAGAGA
TGAAGAACATTCCGAACTGCCTCCCGGATGTCTTCACATATTCCATCCTGATAAAATCCAGCCTGCAGGTTTATGATTTCGACAACCTGCAAATT
CTGCTTTCCGACCTGGAATGTTTGGGGA
Unigenes |
Current Unigene builds | |||||
[SGN-E392252] | SGN-U584678 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T193578 [Download][View] | Facility Assigned ID: FA0AAD24BG03RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.958 | Expected Error Rate: 0.0250 | Quality Trim Threshold: 14.5 |