EST details — SGN-C181478
Search information |
Request: 181478 | Match: SGN-C181478 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C181478 | Clone name: TUS-37-B4 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181478 is on microarray TOM1 spot ID 1-1-5.2.12.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C141247 [cTOF-14-N22] | Trace: SGN-T156673 | EST: SGN-E344695 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E392930 | Length: 467 bp (844 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E392930 [] (trimmed)
GGTTCCTTCAGGACTTTTCGATAAAGATTTGGATGCGTTGTTTTTGAATGACAATAGATTCCGTTTTGGCATCCCGGAGAACTTGGGTAACTCTC
CTGTTTCGGTTCTTGTGTTTGCTAATAACGATCTTGGAGGGTGTATTCCCGCAAGTATTGGGAAAATGGGGAAAACGTTGAATGAGTTGATATTG
ATGAATGATAACCTCACTGGGTGTTTGCCAATGGAGATTGGATTGTTGAACAAGTTAACCGTGTTTGATGTTAGCTTCAACAAGATTCAAGGCTC
ATTGCCATCAACTGTGAGCAAAATGAGGAGTGTGGAGGAACTGAATGTGGCTCACAACAAGCTTACTGGGGTTATACCAGCTAGCATTTGCCAAC
TTCCTAGGTTGCAAAACTTTACGTATTCCTTCAATTAGGGGGGGGGGGGAAGCTCCAGTTTGTGCTGCGACTAGATCTGGTGACGGC
CTGTTTCGGTTCTTGTGTTTGCTAATAACGATCTTGGAGGGTGTATTCCCGCAAGTATTGGGAAAATGGGGAAAACGTTGAATGAGTTGATATTG
ATGAATGATAACCTCACTGGGTGTTTGCCAATGGAGATTGGATTGTTGAACAAGTTAACCGTGTTTGATGTTAGCTTCAACAAGATTCAAGGCTC
ATTGCCATCAACTGTGAGCAAAATGAGGAGTGTGGAGGAACTGAATGTGGCTCACAACAAGCTTACTGGGGTTATACCAGCTAGCATTTGCCAAC
TTCCTAGGTTGCAAAACTTTACGTATTCCTTCAATTAGGGGGGGGGGGGAAGCTCCAGTTTGTGCTGCGACTAGATCTGGTGACGGC
Unigenes |
Current Unigene builds | |||||
[SGN-E392930] | SGN-U579359 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T194256 [Download][View] | Facility Assigned ID: FA0AAD25DA02RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |