EST details — SGN-C182569
Search information |
Request: 182569 | Match: SGN-C182569 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C182569 | Clone name: TUS-39-O15 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C182569 is on microarray TOM1 spot ID 1-1-2.3.8.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C95505 [cLEY-12-D11] | Trace: SGN-T119139 | EST: SGN-E307430 | Direction: 5' | Facility: TIGR |
Clone: SGN-C182569 [TUS-39-O15] | Trace: SGN-T199374 | EST: SGN-E398048 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E393422 | Length: 615 bp (862 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E393422 [] (trimmed)
TTACTTGTGGTGGATTTGCTGTTGGATTTAGATTTAATCACACAATGATGGATGCTTATGGCTTCAAAATGTTTCTAAATGCGTTAAGTGAATTA
ATTCAAGGAGCTTCAACACCTTCTATATTGCCTGTATGGGAAAGACATCTCCTAAGTGCTAGATCATCACCAAGTATTACATGTATTCATCATGA
GTTTGATGAGGAAATTGAATCAAAAATTGCGTGGGAATCTATGGAAGATAAGTTGATACAACAATCATTTTTCTTTGGAAATGAGGAGATGGAAG
TCATTAAAAATCAAGTTCCTCCAAATTATGAATGTACAAAATTCGAGTTATTAATGGCATTTTTATGGAAATGTCGTACCATTGCTCTTAATTTG
CACTCTGATGAAATTGTTCGTTTGACATACGTTATTAATATACGTGGAAAAAAGTCACTCAACATTGAATTACCAATTGGTTATTATGGGAATGC
GTTTATTACTCCAGTTGTTGTATCAAAAGCAGGTTTGTTATGTTCAAATCCAGTGACATATGCAGTTGAATTGATCAAGAAAGTTAAAGATCATA
TAAAATGAAGAATACATCAAATCATTGATAGATTTAATGGTTACT
ATTCAAGGAGCTTCAACACCTTCTATATTGCCTGTATGGGAAAGACATCTCCTAAGTGCTAGATCATCACCAAGTATTACATGTATTCATCATGA
GTTTGATGAGGAAATTGAATCAAAAATTGCGTGGGAATCTATGGAAGATAAGTTGATACAACAATCATTTTTCTTTGGAAATGAGGAGATGGAAG
TCATTAAAAATCAAGTTCCTCCAAATTATGAATGTACAAAATTCGAGTTATTAATGGCATTTTTATGGAAATGTCGTACCATTGCTCTTAATTTG
CACTCTGATGAAATTGTTCGTTTGACATACGTTATTAATATACGTGGAAAAAAGTCACTCAACATTGAATTACCAATTGGTTATTATGGGAATGC
GTTTATTACTCCAGTTGTTGTATCAAAAGCAGGTTTGTTATGTTCAAATCCAGTGACATATGCAGTTGAATTGATCAAGAAAGTTAAAGATCATA
TAAAATGAAGAATACATCAAATCATTGATAGATTTAATGGTTACT
Unigenes |
Current Unigene builds | |||||
[SGN-E393422] | SGN-U579318 | Tomato 200607 | Build 2 | 204 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T194748 [Download][View] | Facility Assigned ID: FA0AAD27AH08RM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.936 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 14.5 |