EST details — SGN-C184050

Search information 
Request: 184050Match: SGN-C184050
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C184050Clone name: TUS-43-M8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184050 is on microarray TOM1 spot ID 1-1-1.1.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3555 [cLEC-20-P3] Trace: SGN-T27823 EST: SGN-E206041 Direction: 5' Facility: TIGR
Clone: SGN-C184050 [TUS-43-M8] Trace: SGN-T197895 EST: SGN-E396569 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396570Length: 458 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396570 [] (trimmed - flagged) TTTGCATGGAGGACTCTCACCTTCTCTGGATACACTGGATAATATCCGAGCGCTGGACCGTATACTAGAGGTTCCACATGAAGGGCCAATGTGTG
ATCTCCTGTGGTCTGATCCACATGATCGGTGTGGTTGGCGATTCTTTGTCCTTGCCGCTGTTTTTACACTTTAACTCTCTTGCTACTGCAACTAC
GACACTTGTACTGTTTGATATGCTCTTCTTTAGCTGGACTACTCTTCACACATTTTCCATGGAACCATCTCTCGCAAATATCACAGCAAATCCAG
AATTCATCAGTCGCATAATTATCATCTCAAGCTCCACACAGAGTTGCGCCTTGTTCATCCTCTTCTTCTTCTTCTTCCTCCTCACCACTGTCGTT
CTCCATTTTAGGTGGAGACACCTTTACTGCCTTGAGTTGGGACTCTGGCTGCCGAGGCTTTCCACTTGATTTGCTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T197896 [Download][View] Facility Assigned ID: FA0AAD31BG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Problems: Possibly chimeric (ends match significantly different genes in arabidopsis)
Sequence Entropy: 0.962 Expected Error Rate: 0.0118 Quality Trim Threshold: 14.5