EST details — SGN-C184067
| Search information |
| Request: 184067 | Match: SGN-C184067 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C184067 | Clone name: TUS-43-N1 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184067 is on microarray TOM1 spot ID 1-1-8.2.19.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C5840 [cLEC-33-E24] | Trace: SGN-T30238 | EST: SGN-E206966 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184067 [TUS-43-N1] | Trace: SGN-T198056 | EST: SGN-E396730 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E396731 | Length: 195 bp (864 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E396731 [] (trimmed)
ATGGGAAGCAAGTATTCTAAGGCAACAAATTCCATAAATGATGCTTTAAGCTCGAGTTATCTCGTTCCTTTTGAAAGTTATCGAGTTCCTTTAGT
AGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTGCGTGATGGAG
AAAAG
AGATTTGGAGGAAGCAACTAATAATTTTGATCACAAGTTTTTAATTGGACATGGTGTCTTTGGGAAGGTTTACAAGGGTGTTTTGCGTGATGGAG
AAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E396731] | SGN-U577094 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T198057 [Download][View] | Facility Assigned ID: FA0AAD31CG01RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0028 | Quality Trim Threshold: 14.5 |
Working
