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EST details — SGN-C184249

Search information 
Request: 184249Match: SGN-C184249
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C184249Clone name: TUS-44-E15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184249 is on microarray TOM1 spot ID 1-1-2.1.16.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24405 [cLED-8-C1] Trace: SGN-T50751 EST: SGN-E232818 Direction: 5' Facility: TIGR
Clone: SGN-C184249 [TUS-44-E15] Trace: SGN-T192115 EST: SGN-E390789 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390552Length: 600 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390552 [] (trimmed) CAGGAAGATTATTTACTCATCAATTACATTAAAAAGAATGGTCATCCTAATTGGCGTGCACTTCCAAAACTTGCAGGTCTATTAAGGTGCGGAAA
AAGTTGTAGGCTTCGATGGACTAATTACTTGAGACCTGATATTAAGCGAGGCAATTTTACTCATCAAGAAGAAGATACAATTATCAAGTTGCATC
AAGTTCTTGGAAACAGTTGGTCTGCTATTGCAGCAAGATTACCCGGAAGAACAGATAACGAAATAAAAAACATTTGGCATACTCGTCTGAAGAAA
AAAAGGAATGAATCTCAACTTAAAGAAACCCAATCGGAGCCTGAAAATACTAATGTAGATGTACATTTGGAGGAGGCCAACAATTCTAATGATAA
ACATTCCGAAATATCGAATCTTAAAATAAACATCGAAATCCAACAACAACCAAGTCCATCATCGTCAGTATCATCATCAAGTGAAGATTCATGTT
CAAATACAACTGCAACGAGTTCAGAGTCGAGAAATCAAATAATGTCCGATAATTTGTTAGAAATTGATGACGATATTTGGTCCGAGGTAGTATGG
GCACAAGTCGATGACAATTATGTTGATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390552] SGN-U564591 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191878 [Download][View] Facility Assigned ID: FA0AAD32AC08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0006 Quality Trim Threshold: 14.5