EST details — SGN-C184397

Search information 
Request: 184397Match: SGN-C184397
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C184397Clone name: TUS-44-K19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184397 is on microarray TOM1 spot ID 1-1-6.3.16.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15785 [cLED-13-P1] Trace: SGN-T51739 EST: SGN-E236461 Direction: 5' Facility: TIGR
Clone: SGN-C184397 [TUS-44-K19] Trace: SGN-T191904 EST: SGN-E390578 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390579Length: 395 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390579 [] (trimmed) GTACTCTGTTCGAGAAGATACTAACGTTAATAAGCTTCGCATACACACTATTGATTCTAAACTACTCTGCCGTTGGCTTCATGGTATTAAGTCTG
CACGAAACACTCACTTCTTATGGAAGTGTATACTATATTGGAACCGTTATACCGATTGTACTAATCCTGCTCAGTAAAGTGATCAAGCCAGCAAG
ACCTGCAAGATCTAAAGCTAGGAAAGAAGAGTGAGTCATACCGTGCTCTTCGATATGGTTGTTTAGTTATTTATTGGTGAAAATACTAGAGCTTT
GCTTCTTGGTAGTTTGTTTTATGTCTCTAGAACTTGTGTTTTATACACATAAAACAAAGCAAATTTGTTTTGAGCACAAATATGGCCATTTAGCA
TTGTTTCCTTCCAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390579] SGN-U566494 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191905 [Download][View] Facility Assigned ID: FA0AAD32AF10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5