EST details — SGN-C185032

Search information 
Request: 185032Match: SGN-C185032
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185032Clone name: TUS-46-F6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185032 is on microarray TOM1 spot ID 1-1-3.2.12.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81125 [cLET-14-J22] Trace: SGN-T106170 EST: SGN-E294327 Direction: 5' Facility: TIGR
Clone: SGN-C81125 [cLET-14-J22] Trace: SGN-T106171 EST: SGN-E294328 Direction: 3' Facility: TIGR
Clone: SGN-C185032 [TUS-46-F6] Trace: SGN-T192252 EST: SGN-E390926 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396286Length: 644 bp (867 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396286 [] (trimmed) GAATTATCAGTGAAGAAAGAAAAAAAGAAAAAGAATGGAGGAAATAGGGTTTCTAGGGATTGGTATTATGGGAAAAGCAATGGCGGTGAACTTGC
TGCGCCATGGTTTCAAGGTTACTGTTTGGAATCGCACCCTCTCCAGGTGTGATGAGCTAGTGCAACATGGAGCCTCTGTTGGAGAAACTCCTGCA
GCAGTAATCAAGAAATGCAAGTATACAATTGCAATGTTGTCTGATCCAGCTGCAGCTCTTTCAGTGGTTTTTGACAAACACGGAGCACTTGAGCA
CGTATGTGCCGGAAAGGGCTATATAGACATGTCAACCGTTGATGCTGATACTTCTTCACAGATTAGCCAGGCCATTACATCAAAGGGTGGTTCAT
TCCTTGAAGCTCCAGTTTCAGGGAGCAAAAAGCCAGCTGAAGATGGACAACTAGTAATCCTAGCAGCTGGTGACAAGGATCTGTACGATCAAGTA
GTACCTGCTTTTGATGTCCTGGGAAAGAAATCTTTTTTCTTGGGAAAGATTGGGAATGGAGCAAAAATGAAACTTGTTGTTAATATGATAATGGG
CAGTATGATGAATGCGTTTTCAGAAGGAATTGTACTGGCTGACAAAAGTGGATTGGACCCTCATACCCTTCTCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396286] SGN-U583712 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197612 [Download][View] Facility Assigned ID: FA0AAD34DC03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0008 Quality Trim Threshold: 14.5