EST details — SGN-C186001

Search information 
Request: 186001Match: SGN-C186001
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C186001Clone name: TUS-48-N15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186001 is on microarray TOM1 spot ID 1-1-2.2.7.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70022 [cLER-13-F16] Trace: SGN-T94676 EST: SGN-E283982 Direction: 5' Facility: TIGR
Clone: SGN-C186001 [TUS-48-N15] Trace: SGN-T192813 EST: SGN-E391487 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391244Length: 379 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391244 [] (trimmed) AGGTACATCTTAAATAGAAGGATGGTTATAAATAAAACCAAAAGACCATTTGCAGCAAGAAGGAAACCCATCACAGCACCAGATCTAAATGCAAC
AATAAAAGCCTTCCCAACACCTTTTCTAGCCTCCAAGGTAGTTCGGGCATTTGCATATGTGGCAATTTTCATTCCAAGGAACCCGGACACCACAG
AGGTAACAGCACCAAGCAGAAATGATACAGTGCTGAAGACAGCAGTTGCAAGAGCTGGCTTGCAAGTTTTGGTGCTGTCATATGTGCACGGCTGG
TTCTTCGTGCTGAATCCCTCAACAGAGCCGAGGAAAACGAAGATCAAAATTGCGAAAGCAACCATGAAAACACCAACATACTGGTACCTGCCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391244] SGN-U584601 Tomato 200607 Build 2 104 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192570 [Download][View] Facility Assigned ID: FA0AAD36CG08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5