EST details — SGN-E200301

Search information 
Request: 200301Match: SGN-E200301
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C1492Clone name: cLEC-12-L20
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C167702 [TUS-1-D4] Trace: SGN-T196 EST: SGN-E379337 Direction: 3' Facility: Avesthagen
Clone: SGN-C167702 [TUS-1-D4] Trace: SGN-T1138 EST: SGN-E379602 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E200301Length: 455 bp (736 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E200301 [] (trimmed) CTCTAAAATTCTCATCCAAAAACGACCACACAATACAGTAGAGAGAGAAAATCAAATCGAAGATTTTACAGAAGGATATCGAGTTTCTTCGGAGA
CGAAGGGTAGCTTAATCCTCCATTCGATCTCAAAAGGGGAGGTGTGATTTTTTTATTTTTTATTTTAAAATAATTTTTGGATATGAGAAGAGGCA
GAGCAACTCCGGCGGCGGCGGCGGCGGCGGTGAAGCCAGATGGATCTGGAGGATTGAAGGAGATTAGGTTTCGTGGAGTTCGGAAGAGGCCATGG
GGGAGATTTGCTGCAGAGATTAGAGATCCATGGAAGAAAACTAGGGTTTGGTTAGGTACTTTTGATTCAGCTGAAGATGCTGCCAAAGCTTATGA
TGCTGCAGCTCGAACTCTTCGTGGACCTAAAGCTAAAACTAATTTCCCTTTACCTATGTATTCTCAGCATCATCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E200301] SGN-U564952 Tomato 200607 Build 2 63 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25886 [Download] [View] Facility Assigned ID: TCABV70TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0123 Quality Trim Threshold: 14.5