EST details — SGN-E203215
Search information |
Request: 203215 | Match: SGN-E203215 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C539 | Clone name: cLEB-3-N20 |
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Library Name: cLEB | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: vegetative shoots including meristems and small expanidng leaves
Development Stage: 8 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C539 [cLEB-3-N20] | Trace: SGN-T22960 | EST: SGN-E203214 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E203215 | Length: 411 bp (604 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E203215 [] (trimmed)
GAGGGGGGGAAAAGGCGTATATAAATATATAAAACACTAAAGCATAAACGTCAACAAGAAATGATTGTTAAACCATATTAGTTTTTCTTTATAGT
ACAGATAGCTGAGTTACATACTATGAATGAACACAAGTTTTCATAAATCATAGGGAGATCTTTCCTTGTAAATTATCTTCTTTGGATTGCTCGAA
TTGGAACCAGGTTGACTGACTCGAGGTCCAGTTCCCTATGCTTCAGTTTTTGGAATAGTTGGTTTGTACAAATAAGAATACTTTTTTGGTTCATC
TCCAGATTTGTACTTCATAGACACAGAAGATGCAAGTTTCACTAGACTTTGTTGAGCCTTTTGTAAGACTCTAGTTGTCTTCACTTTAGCTATAT
AAAAGCCAATAGCATCTACATACCATCCACT
ACAGATAGCTGAGTTACATACTATGAATGAACACAAGTTTTCATAAATCATAGGGAGATCTTTCCTTGTAAATTATCTTCTTTGGATTGCTCGAA
TTGGAACCAGGTTGACTGACTCGAGGTCCAGTTCCCTATGCTTCAGTTTTTGGAATAGTTGGTTTGTACAAATAAGAATACTTTTTTGGTTCATC
TCCAGATTTGTACTTCATAGACACAGAAGATGCAAGTTTCACTAGACTTTGTTGAGCCTTTTGTAAGACTCTAGTTGTCTTCACTTTAGCTATAT
AAAAGCCAATAGCATCTACATACCATCCACT
Unigenes |
Current Unigene builds | |||||
[SGN-E203215] | SGN-U577384 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T22961 [Download] [View] | Facility Assigned ID: TSHAL82TV |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.934 | Expected Error Rate: 0.0124 | Quality Trim Threshold: 14.5 |