EST details — SGN-E204230

Search information 
Request: 204230Match: SGN-E204230
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C1653Clone name: cLEC-13-H17
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173124 is on microarray TOM1: SGN-S1-1-7.2.20.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173124 [TUS-15-F2] Trace: SGN-T188926 EST: SGN-E375312 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E204230Length: 524 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204230 [] (trimmed) CCGGGATGAAACTGACAGCAAGTGTTTCAACGACGAATTGGACAGAGAGAGGTTTGTTTTCCCTCTCTGCTATTGATAATGGTTTGGTTGCTTTC
ATAGAGTCAAATCCTCCCCAAACATACTTTGACGCGACTATTGTTGGATTGAATGCAAGTAGAGGCTCAAATTATGTAGTGTATTTGAATGGTAG
CTTAGCTTTACTCTCGAACTCTAGTAATTCCAGCGATTCAGAGAAACTGGTTTCATTTAGTGTAGCGACGTCAGCTCAATATATGAGACTGGAGT
CTGATGGACACTTGAAAGTGTATGAGTGGCAAAATGGGTGGACTGAGGTGGATGATCTCCTCACAGGTTTTTACGGAGAGTGTTATTATCCCATG
GCATGTGGGAGATATGGCATTTGCTCAGGGGGGCAGTGTAGTTGTCCCAAATCGAGCTCTAATTCAACGACCTATTTCAGACAGATAGATGATAG
ACAGGGTAATCTGGGTTGCTCTGAGGTCACAAGACTTACATGTAATGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204230] SGN-U570752 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25983 [Download] [View] Facility Assigned ID: TCABY45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5