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EST details — SGN-E204716

Search information 
Request: 204716Match: SGN-E204716
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C2149Clone name: cLEC-14-P23
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173368 is on microarray TOM1: SGN-S1-1-3.4.20.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173368 [TUS-15-P6] Trace: SGN-T189035 EST: SGN-E375421 Direction: 3' Facility: INRA
Clone: SGN-C173368 [TUS-15-P6] Trace: SGN-T189036 EST: SGN-E375422 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E204716Length: 502 bp (923 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204716 [] (trimmed) CAGCTATATCCTTACATTCTGTGTCAGCTATAGCGTATGGTTTCCGCTACCGTGCGCCTTTAAAGCACGCTTGTTTATTATACGCCCACCATCTC
CATAGTTTTCATCGCCAAAAATCTCCTCTCTTCTCTTCATCCTTTTGCCGTGTCCTAAATCCATATTCCTTCACGGGGAACTCTCGATTCTCTCG
AATGGAGCAATTTTGGAGTGGAAGTGCCGGTAACAGAAACAAGGGAATGACTGAGCAGTTGCGAAGATGTGGAGTCATAAAATCACAGAAAGTGA
TAGAAATAATGGAAACTGTAGATAGGGGTTTGTTTGTACCTGAGGGTACTCCTGCTTACGTTGATAGCCCCATGAGTATAGGTTACAATGCCACT
ATCTCAGCACCTCATATGCATGCTATGTGTCTTGAATTATTGGAGGATAAGTTGCAGCCTGGCATGCATGCTCTTGATGTTGGTTCAGGAACGGG
GTATCTCACAGCATGTTTTGCTCTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204716] SGN-U568118 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26332 [Download] [View] Facility Assigned ID: TCACC96TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0079 Quality Trim Threshold: 14.5