EST details — SGN-E204959

Search information 
Request: 204959Match: SGN-E204959
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C2479Clone name: cLEC-16-C8
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173402 is on microarray TOM1: SGN-S1-1-1.1.18.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173402 [TUS-16-A16] Trace: SGN-T192912 EST: SGN-E391586 Direction: 3' Facility: INRA
Clone: SGN-C173402 [TUS-16-A16] Trace: SGN-T192913 EST: SGN-E391587 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204959Length: 525 bp (916 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204959 [] (trimmed) AAAGAGGCTTGGTTTTTGCACAAGGAAATGATCAAAAAGGGATTCACTCCGACATTAGAGACTTATCATGCACTCATCAAAGGGTTTTTAAAGAG
GAAAAAGTATTCTGAGGCGAAAGAATTGTTTGAAGAGATGAGAAGATATGGTTTATTGGCAGATAAAGAATTTTACTCTATCTTTGCGGATATGA
ACTATGAACAAGGGAACTTTGATTTGGCGCTTGAGCTTTGTGATGAAGCAGTAGAAAAATGTCTTACAGACAAGACTGATAACAGGAATGCATGA
TGGTTGTCTGACATGATTCTGCATCCTGTAGCTATTTTTGGAACCAGTGACAAAAAACTAGTTGTCTTGCTCCCAATGATGCTAATCTTTTTCGT
GCTGAAGTCAGTTCAAGTTGTGTTACTCTGGAGGTGAAGGGAGGACCAATGAATCACCTTTAAAACAATCCCGCTTGGATCAGAAAGAAGCATGC
AAGCTAGGTGTCGTGGACTTGGAGTTCTACTGCAGTGAAGTATACTAGAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204959] SGN-U597861 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26848 [Download] [View] Facility Assigned ID: TCACJ16TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0166 Quality Trim Threshold: 14.5