EST details — SGN-E227084

Search information 
Request: 227084Match: SGN-E227084
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C17596Clone name: cLED-1-F7
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C168893 [TUS-4-E19] Trace: SGN-T191327 EST: SGN-E390001 Direction: 5' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E227084Length: 513 bp (919 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E227084 [] (trimmed) CAGCTTCAAAGTAAGTATTTTAAGTTTTGAACTAGTGTTACTTATCTTGTTGGGAACTGTTTTGTTTGATTTTTAAAAGAAAAAATATTAAATGA
TCAAAAAAATTATAATATCTTTTTTGTTTTAAGGTTAAATAAATTGATTTAAAAATTTCATTTTTAATTAAAAGAGGGTAGTAAAATGCTTAAAA
AGCTAAAATAATTTAGTGTGAAATATATTATTTTATTATCATTCTAATCAAAATTTCTGGTCACACCTTATAGCATAGGGGTTTCAGAGGGCCCC
GAGATATTTTGTTTTGATCTTATATTTCTCGAATCTATGAAAATGTTATTCCACTAGTGTTTATATTATTTTCTGAAATGCATATTTTTGAATGA
TTCGATATATGCTCAATATTTTCATGCAAAACTGAAAATGAATTTTGGTATTATTGACCGCATTTGTATTGTTTTACTCTCCAAAAATATTATCG
ATCGCATCTATTTTTGTATTTATACAGGCTTGGACAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E227084] SGN-U577701 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T48596 [Download] [View] Facility Assigned ID: TOVAC28TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.886 Expected Error Rate: 0.0093 Quality Trim Threshold: 14.5