EST details — SGN-E228405
| Search information |
| Request: 228405 | Match: SGN-E228405 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C22826 | Clone name: cLED-3-J22 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169127 [TUS-4-O13] | Trace: SGN-T191007 | EST: SGN-E389681 | Direction: 3' | Facility: Avesthagen |
| Clone: SGN-C169127 [TUS-4-O13] | Trace: SGN-T191266 | EST: SGN-E389940 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E228405 | Length: 545 bp (770 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E228405 [] (trimmed)
CAGCAACGCCAATCCTCCTTCCATGGCTTTGACAATTCATCTTCTTTATCCAAATCGTTTCCCTTCACAATTCACAAACTCCCAAACCAATTTGG
TCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACAACGACGACGACATGAACGATATTGACCTGGCATCA
GATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTGAAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTG
CCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGAGGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAG
AATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGTACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCT
ACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGGGGATGATAAT
TCCCTTCGATGTATACCTTCAAGAATCATCCCAAGTTTCACAAAGTCTCGTGCACCAACAACGACGACGACATGAACGATATTGACCTGGCATCA
GATTTTGCAACAGAGGTTGGAAAGATGAACACCCAGATGATACAGAAAGAGGAAGCGTTGAAGAAAAGCAAAGAGCTTTTGTTCGTTGAGTTTTG
CCACTACACGGGATTGAAATCGGAGGAAATGAAGAAGAAATGGAAGAAGTTCAGTGAGGAGGAACAATGGGATTTGGTTAAAAGTTTTGTTTTAG
AATGGGGTGCCCATTTTCATCCATTATCTGCGAGGTCTGTTAAAGAATTAGTCGATGAGTACTTAGTTGAAAACATTTCTGAGTTCAATTCTTCT
ACTTCTTCTTCTTCTTCTTCTTTTTTCCCTGGTCTCAAAAAAATTGATGGGATTTTCAGGGGATGATAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E228405] | SGN-U581176 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T49053 [Download] [View] | Facility Assigned ID: TOVAL59TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 14.5 |
Working
