EST details — SGN-E232768
Search information |
Request: 232768 | Match: SGN-E232768 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C24531 | Clone name: cLED-8-K22 |
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Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C168999 [TUS-4-J5] | Trace: SGN-T190936 | EST: SGN-E389610 | Direction: 3' | Facility: Avesthagen |
Clone: SGN-C168999 [TUS-4-J5] | Trace: SGN-T191193 | EST: SGN-E389867 | Direction: 5' | Facility: Avesthagen |
Sequence |
Sequence Id: SGN-E232768 | Length: 366 bp (1206 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E232768 [] (trimmed)
GGGAGTTCTGTTGCTGGAGATTCTCACCGGGAAAGAAGTTTCCGCTTTATATGAAGGTTCAAACACAAACTTGGCTGAGTTGTTGATCCCGGTGC
TTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTTGACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGCCATGGTCAGA
TTGATCGATAACTGCCTAATGAAAGATCCCTCACATCGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAGCCACACACTC
ATGGGAAACGTCATTTAGCACTTCAGTGTCACCACATAGATTGCCCTAGATCAATGATTGGTTTTCTTTGGTGGTTATTTT
TTAATGATGATAATGCAAAGGAGAGTTTGAGCAACTTCGTTGACCCTTCTCTGCAAGGGAAGTACCCTGTGGAACTTGCTTTTGCCATGGTCAGA
TTGATCGATAACTGCCTAATGAAAGATCCCTCACATCGCCCTAATACGGATGAGATTGTGCAATCTGTTTCAAGAATTATGACAGCCACACACTC
ATGGGAAACGTCATTTAGCACTTCAGTGTCACCACATAGATTGCCCTAGATCAATGATTGGTTTTCTTTGGTGGTTATTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E232768] | SGN-U564297 | Tomato 200607 | Build 2 | 60 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T50701 [Download] [View] | Facility Assigned ID: TOVBD71TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.982 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 12.5 |