EST details — SGN-E233229
| Search information |
| Request: 233229 | Match: SGN-E233229 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C23863 | Clone name: cLED-6-I5 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C175020 is on microarray TOM1: SGN-S1-1-7.1.14.20
See unigene SGN-U575308 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C175020 [TUS-20-E2] | Trace: SGN-T189897 | EST: SGN-E377686 | Direction: 3' | Facility: INRA |
| Clone: SGN-C175020 [TUS-20-E2] | Trace: SGN-T189898 | EST: SGN-E377687 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E233229 | Length: 522 bp (783 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E233229 [] (trimmed)
CCGAAACCAGCTCCATCTCCTCCATCGCCAGTCAAGCCACCTACTACTTGTGATGATATGTACAGTTGCCCATCAGGAACAACGTGTTGCTGTGT
CTACGAGTACTATCACATGTGCTTTGCTTGGGGTTGCTGCCCTATGGAAGGAGCTACTTGCTGTAAAGACCATAACAGTTGCTGCCCACATGATT
ATCCTGTCTGCAATGTTAAAGCCGGCACCTGCTCAATCAGCGAGAATAACCCTCTTTCAGTCAAAGCAATGTCACACATTCTTGCCAAACCTATT
GGATCCTTCAGCAATCAGGGAATGAAAAACACTATCTCTTGAAGTGTCTCCAATGGGAATGCGCAAATTCGCAGTGAATTTGCAAAACCTCATTT
CCAGCTGAAAGTTTATAGTTATAGGTGATTCCAAAAGCAGAGGATAACAGAGTTGCTGCTGATTTCTGTATAGTGCTTCTTTAGTGCTTGTCACA
CAATGCACTAGAACAATATTGAAACAAGATTTCATTGTTCTGCTGTT
CTACGAGTACTATCACATGTGCTTTGCTTGGGGTTGCTGCCCTATGGAAGGAGCTACTTGCTGTAAAGACCATAACAGTTGCTGCCCACATGATT
ATCCTGTCTGCAATGTTAAAGCCGGCACCTGCTCAATCAGCGAGAATAACCCTCTTTCAGTCAAAGCAATGTCACACATTCTTGCCAAACCTATT
GGATCCTTCAGCAATCAGGGAATGAAAAACACTATCTCTTGAAGTGTCTCCAATGGGAATGCGCAAATTCGCAGTGAATTTGCAAAACCTCATTT
CCAGCTGAAAGTTTATAGTTATAGGTGATTCCAAAAGCAGAGGATAACAGAGTTGCTGCTGATTTCTGTATAGTGCTTCTTTAGTGCTTGTCACA
CAATGCACTAGAACAATATTGAAACAAGATTTCATTGTTCTGCTGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E233229] | SGN-U575308 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T50215 [Download] [View] | Facility Assigned ID: TOVAU51TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 12.5 |
Working
