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EST details — SGN-E235398

Search information 
Request: 235398Match: SGN-E235398
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15229Clone name: cLED-11-F12
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C184339 is on microarray TOM1: SGN-S1-1-8.1.16.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184339 [TUS-44-I9] Trace: SGN-T191894 EST: SGN-E390568 Direction: 5' Facility: INRA
Clone: SGN-C184339 [TUS-44-I9] Trace: SGN-T192126 EST: SGN-E390800 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E235398Length: 642 bp (782 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235398 [] (trimmed) ACTATATACCTTTTTTTCATTTAAAAGTAATACCAAGAACATAGCCGAAGGTTTTATTCTACAACATTAGCCATACCCCATAAGGGCTAAATTAC
TATTAACAATATGTCAACAAAACTCAATGGCCTCAATTTCACCAAATTTAGCCCAATCTTCCATATCATGACTAGATATGATTTCTTCATAATAA
GAAGAATTATAATTAGCAGCCATAGTGGAATCATGAGCAGAGGGAGAAGAAGGCATAAAATCTTGCCATAAATTAGAATCCACAATTGATGATGC
ATTATCACTTTGTCCTTTGGATTCTTCCTCTTCCTCTTCTTCTTTTAGTACTGTTGAGTCACTATGCTTTACCATAGCATGATTATTGTATGTAT
GTTTTGGAATCTTTGTTGGATTGCAAGTGTGATTGCCAAAATATGTGGTGTGATACATTATAATTGGATTTTCTTGGATTATTTGAACTTGTTTT
GTGGCCCGGCATTCTTGATCGTACTTGTGGGTGCACCTATAGTAGCACCTAAGATATTTTGAATTGAGTATTTTCTTCTGCCCATATTTTCTCCA
TGCACAACCATCATTCATTGGTGCAGATTCTCTTATCCATGAACCTGAAGTTTTTCTTCTCTTGAAGCAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235398] SGN-U582610 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51408 [Download] [View] Facility Assigned ID: TOVBR30TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0069 Quality Trim Threshold: 14.5