EST details — SGN-E235504

Search information 
Request: 235504Match: SGN-E235504
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15421Clone name: cLED-11-O10
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175527 is on microarray TOM1: SGN-S1-1-4.2.13.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175527 [TUS-21-J5] Trace: SGN-T190598 EST: SGN-E377836 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E235504Length: 547 bp (776 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E235504 [] (trimmed) CAGGCAGGATCTGTATTAGATCATCCCTTTCCTGATTCAGGGCCAGCAGTTGGGAGTAAACGGTCTGTCAGAGATAGACTAGGTAGCATTGCAGA
TTCAACTACTGAATTCAATAATAAACGTCAGCGAGGAAATGGAAGTAGATTGGGCTCTAGTGGCATTGAAGATGGGCGGCTTGGTAAAGATGACC
TGCGATATAAAATCTTGCGGAAAGCTGCGCTTGACCGAGGTCAAAGCAATGGCCAGCAGAATGGGGTGGACCTTCGTGATTTCCTATCAAGGCCT
GCTCAGTCTTCAACAGCAAAACCTAGTTCACGGCAGCACATACCTGATCAGAGGGATAATAGACGACGAGTACCTGAGCCGAGGGATAGTAGAGC
ACGGGTACCTGAGCCAAGGGATAATAGAGCACGAGTACCTGAGGCAAGGGATAATAGACCACGAGTACCTGATCAAAGGGATGATAGACAGCATA
TGCTTCATTCAAGAGGTTCTAGAGAATATTTGCCTGAAATCAAAGATTCAAGACAGTACATGCCTGAAGGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235504] SGN-U566885 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51514 [Download] [View] Facility Assigned ID: TOVBP89TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0107 Quality Trim Threshold: 14.5