EST details — SGN-E235959
| Search information |
| Request: 235959 | Match: SGN-E235959 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C16435 | Clone name: cLED-16-I11 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E235959 | Length: 358 bp (852 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E235959 [] (trimmed)
AATTGCGAATTTCCGCTTCAGCAACCAACTTTTCTAATAAGTTTCGTGTGAAATTCGTGTTGCTTTAATTATTATGCATTTTATGTTTGAATTGT
TGTAGTTGGCAATTCATGTTTAATTTGTTTGTGTTTTTTTTTTTTTGAGAAAATATTGCATTGGGTTTCATTGGAAATTTGTGTTTTTTAAAAAG
TAGTGTGCATCTTATGTTTGGATTGTTGGTGTTGAGAATTCATTTTTAATTTGTTTTTTTTTTTGGGCAAATAATGAATTTAAAATTGTTGATTT
TACTCTTTAGTGGAAATGATTCAACACAATCTTTTAGTATTATTTGGTTGAAAAAAAACCTCATATGAACGAT
TGTAGTTGGCAATTCATGTTTAATTTGTTTGTGTTTTTTTTTTTTTGAGAAAATATTGCATTGGGTTTCATTGGAAATTTGTGTTTTTTAAAAAG
TAGTGTGCATCTTATGTTTGGATTGTTGGTGTTGAGAATTCATTTTTAATTTGTTTTTTTTTTTGGGCAAATAATGAATTTAAAATTGTTGATTT
TACTCTTTAGTGGAAATGATTCAACACAATCTTTTAGTATTATTTGGTTGAAAAAAAACCTCATATGAACGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E235959] | SGN-U580211 | Tomato 200607 | Build 2 | 38 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T52532 [Download] [View] | Facility Assigned ID: TOVCI54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.857 | Expected Error Rate: 0.0096 | Quality Trim Threshold: 14.5 |
Working
