EST details — SGN-E236405

Search information 
Request: 236405Match: SGN-E236405
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15739Clone name: cLED-13-M6
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175679 is on microarray TOM1: SGN-S1-1-4.4.13.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175679 [TUS-21-P13] Trace: SGN-T190559 EST: SGN-E377797 Direction: 3' Facility: INRA
Clone: SGN-C175679 [TUS-21-P13] Trace: SGN-T190560 EST: SGN-E377798 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E236405Length: 624 bp (987 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E236405 [] (trimmed) TTACCATAAACTGCACTGGTAGTTAATATTTGGCATCAGCCATCAATGACACCTCAGGATCTCTGTTTCATCTATGCTTCTTGTACTTCCCCTTT
TGTTTTTGATCTTTGAGTGTTTAGGTTGGTGATTCCATGTGCAGGTGACGTATGTAAAGGAGATGTTGTATTATTTCAACAGAAAGTGTACAAGA
AGTTTGAAAAGATGAGAAGGGGTGGAGAACAATCAGGGAAGAGAACCATTGCTGGTAGGATTGTCAAGGAGAGCTATGGCGCTGCCAAACAGCAG
CATACCTTTACGGTTGAGGTGTTATGGAGCCAAGGGGTTAAACAATTACCTACACTTTTTCCATTGCTTGTGAAGGGACGAAACCTTTATAAGAT
GAAGACTTTCAGACAGAGATGGAGGGATGAAGAGGAAAGACTAGAAGTGCTCGGAGAGAAGCACAAACGTGGAGATGCAGCGAGATTTATTAGAG
CAACAAGAAAATCAAAATCAACAAAGCCGACAAAAGCATCCTCTAAAAACAAAGGTAACAAGCGCCAGAAACTTGATCATCATATGAGGCCAAGC
AAAATGATGCAGACAAGCAATGTAAAGAAACATAATCATTCTATTGATGAACGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236405] SGN-U564695 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51683 [Download] [View] Facility Assigned ID: TOVBX75TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0109 Quality Trim Threshold: 14.5