EST details — SGN-E240917

Search information 
Request: 240917Match: SGN-E240917
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C18885Clone name: cLED-24-O1
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C176091 is on microarray TOM1: SGN-S1-1-8.1.10.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176091 [TUS-23-A17] Trace: SGN-T180956 EST: SGN-E369382 Direction: 3' Facility: INRA
Clone: SGN-C176091 [TUS-23-A17] Trace: SGN-T180957 EST: SGN-E369383 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E240917Length: 409 bp (750 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E240917 [] (trimmed) CAGGAGGAAGCTCTGTCACACTGATATCGTCTCAGTTGGACCAGCAAAAGAGCCTGAGAAAAAGAAGGACGACGGTGCCAAAAAAGATGAAGGGG
CTAAAAAGGATGACGGCAAAAAAGATGATGGGGCTAAAAAAGGGGATGATAAAAAAGGAGGAGCCGATAAGACGAAAGAAGAAGCTCTTCCAGTA
ATGAAAGCTTTTCCAGCTCCTATATTTTATCACTATAATCAGCATCCTTATCAACATTATCAAACCCCTGTTCCTGCTTATTATCACCAACGAAG
CGTTGAAGAAGATCCAAATTCTTGTGTCATCTGTTGAACTGATATTCATGATGAATTTGATTCATATCATGTTATCACTGTTACTCTCTAATATA
TATTCCCTGCGAGTTTTGTGACTTTTTAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240917] SGN-U577844 Tomato 200607 Build 2 31 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T54814 [Download] [View] Facility Assigned ID: TOVDO85TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0257 Quality Trim Threshold: 12.5