EST details — SGN-E241222
| Search information |
| Request: 241222 | Match: SGN-E241222 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C19484 | Clone name: cLED-26-O9 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169531 [TUS-5-P9] | Trace: SGN-T350881 | EST: SGN-E550006 | Direction: 5' | Facility: Avesthagen |
| Clone: SGN-C169531 [TUS-5-P9] | Trace: SGN-T351266 | EST: SGN-E550391 | Direction: 3' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E241222 | Length: 620 bp (797 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E241222 [] (trimmed)
GTTGAATAAGAGAAGTTGTTGAATTCATAACTCGTAAATCATATATATATATATATATATAATTTTAGCGTTTTGTGAATTGCGGATTTCTTTCT
CAAACAAAGCAAGTGTTCGCTTTACTGTTTTTAAGCAAAAATAATTTTAAAGTGTTTGAGTAAAAAAATTTAAAAAAATAGGTCAAAAATCATAA
ATTAATCCAAACAGACGGTAGCAATATTTCTGAAAAAGGAAGAGGACATTATTGAACTTATCCACCCCAACCAACTCACACACCACTAGTACTCG
AAAAGTTGTCGGGGAATAGGATTCTGAATATCAATTTTTTATTAAAGCTACTTTACCTTGAAAATTCTCAAAGAATCAAAAGAGACAACATATAG
AAAGAAGATGAAGGATTGGGCAGCTCCGATCATAGCAACAGCGCTATTTGGATTTCTGTGTCCAGGACTTATATTTCAAATGCCAGGAAAGCATA
CGCCTGTCGATTTCATGAACATGAAGACCAGTATCGCTTCTATGTTGCTTCACACTCTCTTCTTTGGTTTGTTTCTTATGCTTTTACTTGCCATT
CTCAATATACATCTCTATGCTTAATTATCCTATATTTTCCATTTATGAAT
CAAACAAAGCAAGTGTTCGCTTTACTGTTTTTAAGCAAAAATAATTTTAAAGTGTTTGAGTAAAAAAATTTAAAAAAATAGGTCAAAAATCATAA
ATTAATCCAAACAGACGGTAGCAATATTTCTGAAAAAGGAAGAGGACATTATTGAACTTATCCACCCCAACCAACTCACACACCACTAGTACTCG
AAAAGTTGTCGGGGAATAGGATTCTGAATATCAATTTTTTATTAAAGCTACTTTACCTTGAAAATTCTCAAAGAATCAAAAGAGACAACATATAG
AAAGAAGATGAAGGATTGGGCAGCTCCGATCATAGCAACAGCGCTATTTGGATTTCTGTGTCCAGGACTTATATTTCAAATGCCAGGAAAGCATA
CGCCTGTCGATTTCATGAACATGAAGACCAGTATCGCTTCTATGTTGCTTCACACTCTCTTCTTTGGTTTGTTTCTTATGCTTTTACTTGCCATT
CTCAATATACATCTCTATGCTTAATTATCCTATATTTTCCATTTATGAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E241222] | SGN-U569706 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T55416 [Download] [View] | Facility Assigned ID: TOVDW89TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.945 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 14.5 |
Working
