EST details — SGN-E246256
| Search information |
| Request: 246256 | Match: SGN-E246256 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26584 | Clone name: cLEF-40-O5 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176363 is on microarray TOM1: SGN-S1-1-8.1.11.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176363 [TUS-23-M1] | Trace: SGN-T181005 | EST: SGN-E369431 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176363 [TUS-23-M1] | Trace: SGN-T181006 | EST: SGN-E369432 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246256 | Length: 604 bp (802 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246256 [] (trimmed)
ATCAAAAAATTTCACTAAAAAAATAAAAATTGTAACATATTTCGTTGTCCCTTACACTAAACAAGATGTGGTATACTGGTATTATTCCAAACTCG
AAAACATACAAATTTTGAATCTGCATCCATTCAAGTAGATTCCTTCGTCCTCTACTACAAATGTTAACCTCCGCATTCGATCAATTTAGTTCAAA
AATCAGTTCGGTCGATTAGTGCCAACCCCTACTACATATACCTGATGAACACCTCTCAGGGAGACTGGATTTCAGCACGAGGCAGAGCGGGGAAA
TTCTGATCAATGGTCACAAACAGAAACTTTCGTATGGAACATCTGTAAGAAATTAAAATCTTCAGCTGAATGCCGCATGCGCTACTCATTTTGTT
TTCCTTTTTTCACAATAAGATTACTATATTTTTTTTATTAGCATGCATGGTAATGTTCTTTATCCTATAAAATCAGGCATATGTGACTCAAGATG
AAACTCTGTTAGCAACACTAACAGTTCAAGAAGCAGTTTACTACTCTGCACAACTCCAACTCCCAGTTTCCATGACAAAATCAGAGAAAAAACAA
ATAGCAGAGCACACTATTAAAGAGATGGGGTTGC
AAAACATACAAATTTTGAATCTGCATCCATTCAAGTAGATTCCTTCGTCCTCTACTACAAATGTTAACCTCCGCATTCGATCAATTTAGTTCAAA
AATCAGTTCGGTCGATTAGTGCCAACCCCTACTACATATACCTGATGAACACCTCTCAGGGAGACTGGATTTCAGCACGAGGCAGAGCGGGGAAA
TTCTGATCAATGGTCACAAACAGAAACTTTCGTATGGAACATCTGTAAGAAATTAAAATCTTCAGCTGAATGCCGCATGCGCTACTCATTTTGTT
TTCCTTTTTTCACAATAAGATTACTATATTTTTTTTATTAGCATGCATGGTAATGTTCTTTATCCTATAAAATCAGGCATATGTGACTCAAGATG
AAACTCTGTTAGCAACACTAACAGTTCAAGAAGCAGTTTACTACTCTGCACAACTCCAACTCCCAGTTTCCATGACAAAATCAGAGAAAAAACAA
ATAGCAGAGCACACTATTAAAGAGATGGGGTTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246256] | SGN-U573391 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60108 [Download] [View] | Facility Assigned ID: TMGGA87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
