EST details — SGN-E246335
| Search information |
| Request: 246335 | Match: SGN-E246335 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26455 | Clone name: cLEF-40-H2 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176325 is on microarray TOM1: SGN-S1-1-6.3.10.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176325 [TUS-23-K11] | Trace: SGN-T180999 | EST: SGN-E369425 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176325 [TUS-23-K11] | Trace: SGN-T181000 | EST: SGN-E369426 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246335 | Length: 566 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246335 [] (trimmed)
GTGTGTTGGTTTACATAGATTTGATGTTTCTTCTGGTTGCTGTTTCACTGGTTTGCTAAGGAAAAAGTGTGAATCTTCTCACACTACAATACTAT
CTCAAATCCTCTTTGAGACTGTAAGCTTGGTATACCATAGCTCTAATGCAGGGGCAACAGAATACCGTTGGTTCGCTCCAAGAAACTTTAGGTTT
TAATCATGGTTCGACGCCTAGTGAAGGTGGTGTAGATCAACAGATATGTTGGAGTAATTTGCAAAATTCTGCACAGAATCACCTGCCTGATTATA
TGGTTTCTTCAAATGCGACTGATATTCCATTCTTCAATCCTATGAGCCAAGAGAGACAGAATGTAACCAGGGGGAGTTTAGGAGAATCCAGCTCC
TCTATTGCACCGAATTCTGCAAGTTGGAGTGAACAGAAAGCAGATCATGGATGGTCATCCGCAATGACTACATATAATGGACCTTCACTAATCTG
TAATGAACAGCAATGTGGGTCTTCTAACATTATGTCATTGAATGATTTTTTTTCTCAAGGTTCTAGTTCTAGCACCATTCCTCATGAAATC
CTCAAATCCTCTTTGAGACTGTAAGCTTGGTATACCATAGCTCTAATGCAGGGGCAACAGAATACCGTTGGTTCGCTCCAAGAAACTTTAGGTTT
TAATCATGGTTCGACGCCTAGTGAAGGTGGTGTAGATCAACAGATATGTTGGAGTAATTTGCAAAATTCTGCACAGAATCACCTGCCTGATTATA
TGGTTTCTTCAAATGCGACTGATATTCCATTCTTCAATCCTATGAGCCAAGAGAGACAGAATGTAACCAGGGGGAGTTTAGGAGAATCCAGCTCC
TCTATTGCACCGAATTCTGCAAGTTGGAGTGAACAGAAAGCAGATCATGGATGGTCATCCGCAATGACTACATATAATGGACCTTCACTAATCTG
TAATGAACAGCAATGTGGGTCTTCTAACATTATGTCATTGAATGATTTTTTTTCTCAAGGTTCTAGTTCTAGCACCATTCCTCATGAAATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246335] | SGN-U563918 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60187 [Download] [View] | Facility Assigned ID: TMGGD37TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |
Working
