EST details — SGN-E247549

Search information 
Request: 247549Match: SGN-E247549
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C27177Clone name: cLEF-42-M2
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176644 is on microarray TOM1: SGN-S1-1-7.4.9.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176644 [TUS-24-H18] Trace: SGN-T193452 EST: SGN-E392126 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247549Length: 525 bp (1002 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E247549 [] (trimmed) TATAATAACAAACAACAATTTCTACCAAAGTTTTTCAAATTCTAAATTTCATCAAAAAAACAACAACAATGGTGGTCTTAACAAAACCTGCCATT
ACTCACTTCCCTATAGTGAAAAACTCTTTCAAATCACCCTCTTACATCAATGATATCCCTGTAATAGACCTCTCTAAAGCCAACTCCAAGAACCT
CATCGTTAATGCCTGCGAAGAATTCGGATTCTTCAAAGTCATAAACCATGATGTTCCTATGGAATTCATAAGTAAACTCGAATCCGAAGCCGTTA
AATTCTTCTCCTCTCCCCTCTCTGAGAAACTAAAGGCAGGGCCTGCTGATCCTTTTGGTTATGGCAATAAGAAAATCGGACAAAATGGCGATATC
GGTTGGGTTGAATACATTCTCCTTTCAACAAATTCTGAATTCAATTACCAGAAATTCGCATCTGTATTAGGTGTCAATCCAGAAAACATTCGGGC
TGCGGTGAATGATTATGTGTCATCAGTGAAGAAAATGTCATGTGAGATTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247549] SGN-U578575 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60593 [Download] [View] Facility Assigned ID: TMGGJ73TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5