EST details — SGN-E247678

Search information 
Request: 247678Match: SGN-E247678
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C27127Clone name: cLEF-42-K1
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176621 is on microarray TOM1: SGN-S1-1-6.3.9.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176621 [TUS-24-G19] Trace: SGN-T192959 EST: SGN-E391633 Direction: 3' Facility: INRA
Clone: SGN-C176621 [TUS-24-G19] Trace: SGN-T192960 EST: SGN-E391634 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247678Length: 517 bp (954 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247678 [] (trimmed) AATGGCTCTCTGCCTCTCAGCTTCAAAATCCATTGCTTTCAACATAAGATGCAGCAATTCTACAAGTGATCCTCTTCCGTCTTCCTCTGTTTTCA
AATCCCTCAGAATTCCCCGTTTCTGGCCATGGCAAAAGGTAAAGATGGGACCTTTGACAGTATCTCCAATGGGGTTTGGTACTTGGGCATGGGGC
AATCAGCTTCTCTGGGGATATCAAGATTCCATGGACTCTGAACTTCAGCAGACTTTCAATCTTGCTGTGGAGAATGGGATTAACCTATTTGATAC
AGCTGATTCTTATGGGACTGGAAAGTTAAATGGACAAAGTGAGAAACTTCTTGGAAAATTCATTCGCGAGTTTCCAGGAGACAAGCAAGTAAAGA
ATGACATCGTTATTGCAACAAAATTTGCAGCATACCCATGGCGCCTAACACCTGGACAATTTGTGAATGCTTGCAAGTCTTCTCTGGAAAGAATG
GAAATCGAGCAAATTGGAATTGGACAATTGCATTGGTCAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247678] SGN-U576762 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60722 [Download] [View] Facility Assigned ID: TMGGI61TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0073 Quality Trim Threshold: 14.5