EST details — SGN-E248296

Search information 
Request: 248296Match: SGN-E248296
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C32358Clone name: cLEG-1-A15
cartOrder Clone
Library Name: cLEGOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: breaker fruit

Microarray: Alias clone SGN-C183627 is on microarray TOM1: SGN-S1-1-8.3.1.8
See unigene SGN-U578195 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C183627 [TUS-42-K17] Trace: SGN-T195962 EST: SGN-E394636 Direction: 5' Facility: INRA
Clone: SGN-C183627 [TUS-42-K17] Trace: SGN-T195962 EST: SGN-E399179 Direction: 5' Facility: INRA
Clone: SGN-C183627 [TUS-42-K17] Trace: SGN-T199408 EST: SGN-E399178 Direction: 3' Facility: INRA
Clone: SGN-C183627 [TUS-42-K17] Trace: SGN-T199571 EST: SGN-E398245 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E248296Length: 558 bp (855 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E248296 [] (trimmed) GAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGA
GTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAG
GTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCT
AAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTC
AGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAA
CATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACANGGGCTAGCGTTACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E248296] SGN-U578195 Tomato 200607 Build 2 342 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T64359 [Download] [View] Facility Assigned ID: TBFAA08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0077 Quality Trim Threshold: 14.5