EST details — SGN-E248296
| Search information |
| Request: 248296 | Match: SGN-E248296 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32358 | Clone name: cLEG-1-A15 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183627 is on microarray TOM1: SGN-S1-1-8.3.1.8
See unigene SGN-U578195 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C183627 [TUS-42-K17] | Trace: SGN-T195962 | EST: SGN-E394636 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183627 [TUS-42-K17] | Trace: SGN-T195962 | EST: SGN-E399179 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183627 [TUS-42-K17] | Trace: SGN-T199408 | EST: SGN-E399178 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183627 [TUS-42-K17] | Trace: SGN-T199571 | EST: SGN-E398245 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248296 | Length: 558 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248296 [] (trimmed)
GAAATTGAAAGCTTAAGAGTGGGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGA
GTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAG
GTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCT
AAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTC
AGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAA
CATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACANGGGCTAGCGTTACT
GTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAG
GTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTACTTTTACATTTCT
AAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTC
AGTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAA
CATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACANGGGCTAGCGTTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248296] | SGN-U578195 | Tomato 200607 | Build 2 | 342 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64359 [Download] [View] | Facility Assigned ID: TBFAA08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
