EST details — SGN-E248360
| Search information |
| Request: 248360 | Match: SGN-E248360 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32396 | Clone name: cLEG-1-E3 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183657 is on microarray TOM1: SGN-S1-1-2.4.1.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183657 [TUS-42-L23] | Trace: SGN-T196205 | EST: SGN-E394879 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183657 [TUS-42-L23] | Trace: SGN-T196205 | EST: SGN-E399412 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248360 | Length: 522 bp (854 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248360 [] (trimmed)
TTTTTGTGAACTTCGACGATTCGCTCGATGTCTAAACACAGCTCCGACTGTCCCACCTATGAATTTCACCGGCAACTATGGTTCTACGAACGTAA
CAATACCGACGTTACAACCTACGGACCAAATATTAGTCAATCCTGAGAAAAAAGTACTCAATTTTGATGATGTTAAAGAGTTGTTTACGGGTGTA
TCCACCTCGAAGTTGATTAGATCATCGTTAACACTTCAAATGGCATCGATTGAGTCTATGGTTGACCTAGGTATTTGGGTAATGAATTCGAAATT
CATGCGTATGCCAGTATTTAAGGAGGTGATACTAGGGTTTGTTAAAAGGACATTTTATGAACATTTTTGTGCTGGAAAAGACTTAATTGAAGTAG
GAAAGACGGTTAGTAAGTTGTCGAGCCTTGATTTAAAAGGCATGCTTGATTATGGTGTGGAACATGCAATGGATAATGAGTCTTGTGATCGAAGT
ATGAATGTTTTTCTTCAGACAGCCGAATTAACCAAGTCTCTTCCATC
CAATACCGACGTTACAACCTACGGACCAAATATTAGTCAATCCTGAGAAAAAAGTACTCAATTTTGATGATGTTAAAGAGTTGTTTACGGGTGTA
TCCACCTCGAAGTTGATTAGATCATCGTTAACACTTCAAATGGCATCGATTGAGTCTATGGTTGACCTAGGTATTTGGGTAATGAATTCGAAATT
CATGCGTATGCCAGTATTTAAGGAGGTGATACTAGGGTTTGTTAAAAGGACATTTTATGAACATTTTTGTGCTGGAAAAGACTTAATTGAAGTAG
GAAAGACGGTTAGTAAGTTGTCGAGCCTTGATTTAAAAGGCATGCTTGATTATGGTGTGGAACATGCAATGGATAATGAGTCTTGTGATCGAAGT
ATGAATGTTTTTCTTCAGACAGCCGAATTAACCAAGTCTCTTCCATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248360] | SGN-U578070 | Tomato 200607 | Build 2 | 64 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64423 [Download] [View] | Facility Assigned ID: TBFAA26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0251 | Quality Trim Threshold: 14.5 |
Working
