EST details — SGN-E248980

Search information 
Request: 248980Match: SGN-E248980
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C29040Clone name: cLEF-49-P22
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C177124 is on microarray TOM1: SGN-S1-1-7.4.8.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177124 [TUS-25-L18] Trace: SGN-T182074 EST: SGN-E369585 Direction: 3' Facility: INRA
Clone: SGN-C177124 [TUS-25-L18] Trace: SGN-T182075 EST: SGN-E369586 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E248980Length: 447 bp (1041 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E248980 [] (trimmed) TATACAGACTACCCTCCTTTTATGATTTGCTTGAGGGCGAGATTTTTCTTCAGAACCTTCCAAGCATAATAACTGCACATGCCTTAGATCCTCAA
CCAGGAGAGAGAATATTGGACATGTGTGCAGCTCCAGGGGGGAAAACCACAGCAATAGCAAGCCTTATGAAGGACAAAGGGGAGGTTGTTGCTGT
TGACAGATCTCATAATAAGGTGCTTGGAATTCANAAATTAACAGCTGAGATGGGTTTAAGCTGTATAACTACATATAAGCTTGACGCGCTGAAGT
CTGTTTGCCATGGAGCTGAATCTGATAGTTTGCCTTACACATGCAGTGCTGAGGATGCGCGAACACCAGATTTATTATCCACTGGTATAGATGGA
TTTGATGCAGAGTTGCTATTCTAAAAGAATTGACACAGTTGATTCCTTGAGGAGTAATGCCAAATAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E248980] SGN-U572963 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62488 [Download] [View] Facility Assigned ID: TMGHN95TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0244 Quality Trim Threshold: 14.5