EST details — SGN-E249006
| Search information |
| Request: 249006 | Match: SGN-E249006 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C28930 | Clone name: cLEF-49-K17 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177069 is on microarray TOM1: SGN-S1-1-6.2.8.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177069 [TUS-25-J11] | Trace: SGN-T181988 | EST: SGN-E369035 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177069 [TUS-25-J11] | Trace: SGN-T181989 | EST: SGN-E369036 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249006 | Length: 607 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E249006 [] (trimmed)
TTTTGATCATAATGTGACGAATCGAATTTTTACTAGCAAGAATAAAATAATAATTCAGACAGTCTATCAAACTAAACTATAAAAACTTTTCGATA
TGTAACATTATGACATGACATATTACAATAAATTTCTTACAATGGCTCTACCAACATCAGAAAGTTCATGAACATCTATATTTAATTTAGAAAGT
GGTGAATATTTAATAGTTGTAGCTTTAAAATATTCTTCACATTCTTGTGCATCACCAGAAGAACCAACCATTCCATCTTCTGCAAATTTTGGATC
ACCTTTTGTTAATGCTTCTATTGCTTCTGGCATACTTGCTGTTAAAATTACCTTATACGAAAAGGCACAATTCTTCAAAGGATCTTTCCAAGCTT
GAGGAGGATTAGAATGCCTAAGTTTTGAAATAGTATTAGCAGCTTGATTAGCTTTAGATTTAATAGCATCAACCATAATTAATGCTAATGTTGTA
ATATCTCCTGCTTTTTCACTTCTTTTGTCTAAAGACAAAGTTTTCACACACAAATTATAATTTGGTGTGTTCTTGCATGTTGTCTCTACTAGATT
ATTATTCCCACTTGTTACTAGCAACATAGCAAGAAAC
TGTAACATTATGACATGACATATTACAATAAATTTCTTACAATGGCTCTACCAACATCAGAAAGTTCATGAACATCTATATTTAATTTAGAAAGT
GGTGAATATTTAATAGTTGTAGCTTTAAAATATTCTTCACATTCTTGTGCATCACCAGAAGAACCAACCATTCCATCTTCTGCAAATTTTGGATC
ACCTTTTGTTAATGCTTCTATTGCTTCTGGCATACTTGCTGTTAAAATTACCTTATACGAAAAGGCACAATTCTTCAAAGGATCTTTCCAAGCTT
GAGGAGGATTAGAATGCCTAAGTTTTGAAATAGTATTAGCAGCTTGATTAGCTTTAGATTTAATAGCATCAACCATAATTAATGCTAATGTTGTA
ATATCTCCTGCTTTTTCACTTCTTTTGTCTAAAGACAAAGTTTTCACACACAAATTATAATTTGGTGTGTTCTTGCATGTTGTCTCTACTAGATT
ATTATTCCCACTTGTTACTAGCAACATAGCAAGAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249006] | SGN-U579697 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62514 [Download] [View] | Facility Assigned ID: TMGHK69TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.929 | Expected Error Rate: 0.0135 | Quality Trim Threshold: 12.5 |
Working
