EST details — SGN-E253276
Search information |
Request: 253276 | Match: SGN-E253276 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C33308 | Clone name: cLEG-26-E24 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C188126 [TUS-54-G4] | Trace: SGN-T352324 | EST: SGN-E551449 | Direction: 5' | Facility: Giovanni |
Sequence |
Sequence Id: SGN-E253276 | Length: 476 bp (970 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E253276 [] (trimmed)
TACCGTACCATTGTTTGTCCATACATAAATTATAGCAGATTACAATATACGTTTACTCGTTATGTATAACCTCTTTGTGCCTTGTAAAAACCAAC
TAGAACAAAAATCCAAGTACCAAGTTGGACTCATGAAAAGTAAACATAAAAGCGCAAAAAACAAAAAGATCAACAAAAAAACCAATGAAAAATAA
CAGAAGGTAACTAATGAAAAAGTAAGCGATGGTTGAACCTGGGATTCACTTTACTTGAATTATTGTCTGAAGGTCTCGGTCTCGATCGTAGTTAT
CTCAAAGATTATATGGATTGGTTTCATCTTTTCTGTTCTTGCAACTACTACCCACCATGTCCTCAGCCAGAACTCACCATGGGCACCATTCAACA
TACCGATATTGGTTTTGTAACGATCCTTCTACAAGATGATATGGGAGGGCTCCAAGTTCTTCACCAGAATCATTGGGTTGAAGTTCCTCCTACAC
C
TAGAACAAAAATCCAAGTACCAAGTTGGACTCATGAAAAGTAAACATAAAAGCGCAAAAAACAAAAAGATCAACAAAAAAACCAATGAAAAATAA
CAGAAGGTAACTAATGAAAAAGTAAGCGATGGTTGAACCTGGGATTCACTTTACTTGAATTATTGTCTGAAGGTCTCGGTCTCGATCGTAGTTAT
CTCAAAGATTATATGGATTGGTTTCATCTTTTCTGTTCTTGCAACTACTACCCACCATGTCCTCAGCCAGAACTCACCATGGGCACCATTCAACA
TACCGATATTGGTTTTGTAACGATCCTTCTACAAGATGATATGGGAGGGCTCCAAGTTCTTCACCAGAATCATTGGGTTGAAGTTCCTCCTACAC
C
Unigenes |
Current Unigene builds | |||||
[SGN-E253276] | SGN-U578448 | Tomato 200607 | Build 2 | 590 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T68199 [Download] [View] | Facility Assigned ID: TBFDX36TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.954 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 14.5 |