EST details — SGN-E254109
| Search information |
| Request: 254109 | Match: SGN-E254109 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C35438 | Clone name: cLEG-34-P23 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180837 is on microarray TOM1: SGN-S1-1-6.3.17.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180837 [TUS-35-G11] | Trace: SGN-T187484 | EST: SGN-E375716 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180837 [TUS-35-G11] | Trace: SGN-T187485 | EST: SGN-E375717 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254109 | Length: 553 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254109 [] (trimmed)
AAAGTACCTCAAATATTCGTTCTACCGCCAAAAGACAGGGCTAAAAAATGTGAAACACATTTCGTTTTTCCAGTGATAGACCTTCAAGGTATCGA
TGAGGATCCGATTAAGCATAAGGAGATAGTGGACAAAGTTCGAGATGCATCGCAGAAATGGGGTCACTTGCTCATAATCCCACTGAAGCTGAACT
ACAGGATATGATCAGTGAAGTTGATGCTGATCAGAATGGAACCATTGATTTTCCAGAGTTCTTGAATCTGATGGCACGGAAGATGAAGGACACTG
ATTCTGAGGAAGAACTCATAGAGGCTTTTAAGGTTTTTGATAAAGATCAGAATGGCTTTATTTCTGCAGCTGAGCTTCGTCATGTAATGACAAAC
CTTGGAGAGAAGCTGACTGATGAAGAGGTGGATGAGATGATCCGAGAGGCAGATATTGATGGTGATGGACAAGTTAATTATGAGGAGTTTGTCCG
TATGATGCTTGCCAAGTGATGACTTTAAGATTCTGTTAGCTACTATGTAATCTATGATAGCTGCTCAGTTAGTTACTA
TGAGGATCCGATTAAGCATAAGGAGATAGTGGACAAAGTTCGAGATGCATCGCAGAAATGGGGTCACTTGCTCATAATCCCACTGAAGCTGAACT
ACAGGATATGATCAGTGAAGTTGATGCTGATCAGAATGGAACCATTGATTTTCCAGAGTTCTTGAATCTGATGGCACGGAAGATGAAGGACACTG
ATTCTGAGGAAGAACTCATAGAGGCTTTTAAGGTTTTTGATAAAGATCAGAATGGCTTTATTTCTGCAGCTGAGCTTCGTCATGTAATGACAAAC
CTTGGAGAGAAGCTGACTGATGAAGAGGTGGATGAGATGATCCGAGAGGCAGATATTGATGGTGATGGACAAGTTAATTATGAGGAGTTTGTCCG
TATGATGCTTGCCAAGTGATGACTTTAAGATTCTGTTAGCTACTATGTAATCTATGATAGCTGCTCAGTTAGTTACTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254109] | SGN-U579995 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70167 [Download] [View] | Facility Assigned ID: TBFFE96TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0115 | Quality Trim Threshold: 12.5 |
Working
