EST details — SGN-E255393
| Search information |
| Request: 255393 | Match: SGN-E255393 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C34428 | Clone name: cLEG-30-N5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C182390 is on microarray TOM1: SGN-S1-1-5.4.8.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182390 [TUS-39-H4] | Trace: SGN-T191540 | EST: SGN-E390214 | Direction: 5' | Facility: INRA |
| Clone: SGN-C182390 [TUS-39-H4] | Trace: SGN-T191764 | EST: SGN-E390438 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255393 | Length: 634 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255393 [] (trimmed)
TTAGTCGTAACTTTAGTCAAACTTCGTAATAATTTAGTAAGTTAAAATATATTAGAAATTTTCAGAATTCATAAACTTTAAATTTTAAATTTTGA
CTTCGCTTTGTGTGACTATACAATTACAGAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCTG
TTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAAT
ATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTAAGTAAAGTTTGGAAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTG
TTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTTATGGGTTGCTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGA
ATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGAATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTA
ATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCATCTGGAGAACGGACGAT
CTTCGCTTTGTGTGACTATACAATTACAGAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAACAGGTTACTCCTG
TTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTTTGAGAGTGGAAAT
ATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTATAAACTAAGTAAAGTTTGGAAGGTGACAAAAAGAAAGACAAAAATCTTGGAATTG
TTTTAGACAACCAAGGTTTTCTTGCTCAGAATGTCTGTTGCCTTGTTATGGGTTGCTTCTCCTTGTGACGTCTCAAATGGGACAAGTTTCATGGA
ATCAGTCCGGGAGGGAAACCGTTTTTTTGATTCATCGAGGCATAGGAATTTGGTGTCCAATGAGAGAATCAATAGAGGTGGTGGAAAGCAAACTA
ATAATGGACGGAAATTTTCTGTACGGTCTGCTATTTTGGCTACTCCATCTGGAGAACGGACGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255393] | SGN-U580375 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69119 [Download] [View] | Facility Assigned ID: TBFEO75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 14.5 |
Working
