EST details — SGN-E259105
Search information |
Request: 259105 | Match: SGN-E259105 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C37275 | Clone name: cLEG-41-J15 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177357 is on microarray TOM1: SGN-S1-1-6.2.7.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177357 [TUS-26-F11] | Trace: SGN-T182482 | EST: SGN-E369868 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E259105 | Length: 459 bp (885 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E259105 [] (trimmed)
GAATCCAAACATGCCGTTACCCGTTTAGCCCAAAAGATCAACAAAAATCCAACTTCTTCTCCTTCCAATTCCACTTCTCTAAATCAAGAATCATC
TTCCCCTGATGTTCTTCCTGAGATTCTTCGACATTCTTTACCTTCCAAGATTTTCCATTCTCCTTCCTCTGCAGATTCCTCACTCTCTAATACTT
CCAAATGGGTTCTCCCTACTGATCCCAATACGACAAATTCCGTATCTCCAGATGCTCTTAATCCTCTCAGAGCTTATGTTTCTCTTCCACAAGTA
ACCTTTGGACCTAAAAGGTGGCAGTTGCCAGATACAGAAAACTCTGTACAAGCCTCAACGGCAAATGACTTGCGTCGCGATAAATACACACCGAT
TAATCCTGAAAAACTTAAAGCTGCAGCTGTGGGGATGTCTCAAATTGCAAAGGCATTTGCTATTGCCACTGCTCTTGTC
TTCCCCTGATGTTCTTCCTGAGATTCTTCGACATTCTTTACCTTCCAAGATTTTCCATTCTCCTTCCTCTGCAGATTCCTCACTCTCTAATACTT
CCAAATGGGTTCTCCCTACTGATCCCAATACGACAAATTCCGTATCTCCAGATGCTCTTAATCCTCTCAGAGCTTATGTTTCTCTTCCACAAGTA
ACCTTTGGACCTAAAAGGTGGCAGTTGCCAGATACAGAAAACTCTGTACAAGCCTCAACGGCAAATGACTTGCGTCGCGATAAATACACACCGAT
TAATCCTGAAAAACTTAAAGCTGCAGCTGTGGGGATGTCTCAAATTGCAAAGGCATTTGCTATTGCCACTGCTCTTGTC
Unigenes |
Current Unigene builds | |||||
[SGN-E259105] | SGN-U570574 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T72137 [Download] [View] | Facility Assigned ID: TBFGG56TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.943 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 14.5 |