EST details — SGN-E259446
Search information |
Request: 259446 | Match: SGN-E259446 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C37478 | Clone name: cLEG-42-C9 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177455 is on microarray TOM1: SGN-S1-1-4.2.6.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177455 [TUS-26-J13] | Trace: SGN-T182580 | EST: SGN-E369966 | Direction: 3' | Facility: INRA |
Clone: SGN-C177455 [TUS-26-J13] | Trace: SGN-T182581 | EST: SGN-E369967 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E259446 | Length: 590 bp (938 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259446 [] (trimmed)
CAAAAAAACAAAGCAAAAGAAAAAAGTTTTTTTAATCATTCAATTCAATCAAACCTACTACTATAATCTTCCCATTTTTTTTCCCCCTTTTCTTG
TTCAATCATTCTCTACAAAAAAAGGCATATATATATATATATATATAAATATGGCAAAGAGTTTGTTCAAGCAAGAACATGATCTTGAGAAGAGA
CGCGCTGAAGCTTCTAGGATTAGGGAAAAATACACAGATAGGATTCCGGTAATAGTAGAAAAGGCTGAAAGGAGTGATATTCCCAACATTGACAA
GAAAAAGTATCTTGTCCCAGCTGACTTGACGGTAGGGCAGTTTGTGTATGTCATTCGAAAAAGGATTAAATTGAGTGCAGAAAAGGCAATTTTCA
TATTCGTCGACAATGTCCTACCACCAACAGGTGCAATCATGTCTTCCATCTATGACGAGAAGAAGGATGAAGACGGTTTCCTTTATGTTACCTAC
AGTGGAGAGAACACATTTGGGGAACCTTAATTTGGTGTAGCTTTCATGGTATTGACAGTGGATCATTTGCTTAAAGCTCTCATTTTCATCGTCCA
TCGACAGTGAAAATCACTTG
TTCAATCATTCTCTACAAAAAAAGGCATATATATATATATATATATAAATATGGCAAAGAGTTTGTTCAAGCAAGAACATGATCTTGAGAAGAGA
CGCGCTGAAGCTTCTAGGATTAGGGAAAAATACACAGATAGGATTCCGGTAATAGTAGAAAAGGCTGAAAGGAGTGATATTCCCAACATTGACAA
GAAAAAGTATCTTGTCCCAGCTGACTTGACGGTAGGGCAGTTTGTGTATGTCATTCGAAAAAGGATTAAATTGAGTGCAGAAAAGGCAATTTTCA
TATTCGTCGACAATGTCCTACCACCAACAGGTGCAATCATGTCTTCCATCTATGACGAGAAGAAGGATGAAGACGGTTTCCTTTATGTTACCTAC
AGTGGAGAGAACACATTTGGGGAACCTTAATTTGGTGTAGCTTTCATGGTATTGACAGTGGATCATTTGCTTAAAGCTCTCATTTTCATCGTCCA
TCGACAGTGAAAATCACTTG
Unigenes |
Current Unigene builds | |||||
[SGN-E259446] | SGN-U584703 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T72207 [Download] [View] | Facility Assigned ID: TBFGI17TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |