EST details — SGN-E259446
| Search information |
| Request: 259446 | Match: SGN-E259446 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37478 | Clone name: cLEG-42-C9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177455 is on microarray TOM1: SGN-S1-1-4.2.6.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177455 [TUS-26-J13] | Trace: SGN-T182580 | EST: SGN-E369966 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177455 [TUS-26-J13] | Trace: SGN-T182581 | EST: SGN-E369967 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259446 | Length: 590 bp (938 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259446 [] (trimmed)
CAAAAAAACAAAGCAAAAGAAAAAAGTTTTTTTAATCATTCAATTCAATCAAACCTACTACTATAATCTTCCCATTTTTTTTCCCCCTTTTCTTG
TTCAATCATTCTCTACAAAAAAAGGCATATATATATATATATATATAAATATGGCAAAGAGTTTGTTCAAGCAAGAACATGATCTTGAGAAGAGA
CGCGCTGAAGCTTCTAGGATTAGGGAAAAATACACAGATAGGATTCCGGTAATAGTAGAAAAGGCTGAAAGGAGTGATATTCCCAACATTGACAA
GAAAAAGTATCTTGTCCCAGCTGACTTGACGGTAGGGCAGTTTGTGTATGTCATTCGAAAAAGGATTAAATTGAGTGCAGAAAAGGCAATTTTCA
TATTCGTCGACAATGTCCTACCACCAACAGGTGCAATCATGTCTTCCATCTATGACGAGAAGAAGGATGAAGACGGTTTCCTTTATGTTACCTAC
AGTGGAGAGAACACATTTGGGGAACCTTAATTTGGTGTAGCTTTCATGGTATTGACAGTGGATCATTTGCTTAAAGCTCTCATTTTCATCGTCCA
TCGACAGTGAAAATCACTTG
TTCAATCATTCTCTACAAAAAAAGGCATATATATATATATATATATAAATATGGCAAAGAGTTTGTTCAAGCAAGAACATGATCTTGAGAAGAGA
CGCGCTGAAGCTTCTAGGATTAGGGAAAAATACACAGATAGGATTCCGGTAATAGTAGAAAAGGCTGAAAGGAGTGATATTCCCAACATTGACAA
GAAAAAGTATCTTGTCCCAGCTGACTTGACGGTAGGGCAGTTTGTGTATGTCATTCGAAAAAGGATTAAATTGAGTGCAGAAAAGGCAATTTTCA
TATTCGTCGACAATGTCCTACCACCAACAGGTGCAATCATGTCTTCCATCTATGACGAGAAGAAGGATGAAGACGGTTTCCTTTATGTTACCTAC
AGTGGAGAGAACACATTTGGGGAACCTTAATTTGGTGTAGCTTTCATGGTATTGACAGTGGATCATTTGCTTAAAGCTCTCATTTTCATCGTCCA
TCGACAGTGAAAATCACTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259446] | SGN-U584703 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72207 [Download] [View] | Facility Assigned ID: TBFGI17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |
Working
