EST details — SGN-E259596
| Search information |
| Request: 259596 | Match: SGN-E259596 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37701 | Clone name: cLEG-42-N24 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177571 is on microarray TOM1: SGN-S1-1-8.3.6.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177571 [TUS-26-O9] | Trace: SGN-T182243 | EST: SGN-E368833 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177571 [TUS-26-O9] | Trace: SGN-T182244 | EST: SGN-E368834 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259596 | Length: 587 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259596 [] (trimmed)
AAGTGCCGCTTATGGATACTGGAACTTTTGTTTCAACACACTTTATCACTCAACTCAGGTTATTGCTGTGCTGGTAGGAGGAATATCTATCCTGG
CTGGTCATATTACTGCAGAACAACTTACCAAATTCGTATTATACAGTGAATGGTTGATTTATTCTACATGGTGGGTAGGGGACAATTTTTCGTCA
TTGATGCAATCTATTGGGGCAAGTGAGAAGGTTTTTCAATTAATGGATCTCGGTTCTAGAGATAAATTCATTGACAAAGGAGCCAAGTTGGAAGG
ATTAGCAGGACGCATTGAATTTGTGAATATTAGTTTCTACTATCCTTCAAGAGTTGAGGTGCCAGTACTTCAACATATTAACTTTGTGGTGCATC
CCGGTGAAGTAGTAGCACTCGTTGGCCTAAGTGGTAGTGGAAAAAGCACTCTGGTGAACCTTCTCCTTCGGCTGTATGAGCCAATAAGTGGGCAG
ATATCTATTGATGGCTACCCGATTAGAGATTTGAACATCAAGTGGTTGAGGGAAAGAATTGGATATGTGGGACAGGAACCTAGACTTTTCCGCAT
GGATATCAGCTCAAACA
CTGGTCATATTACTGCAGAACAACTTACCAAATTCGTATTATACAGTGAATGGTTGATTTATTCTACATGGTGGGTAGGGGACAATTTTTCGTCA
TTGATGCAATCTATTGGGGCAAGTGAGAAGGTTTTTCAATTAATGGATCTCGGTTCTAGAGATAAATTCATTGACAAAGGAGCCAAGTTGGAAGG
ATTAGCAGGACGCATTGAATTTGTGAATATTAGTTTCTACTATCCTTCAAGAGTTGAGGTGCCAGTACTTCAACATATTAACTTTGTGGTGCATC
CCGGTGAAGTAGTAGCACTCGTTGGCCTAAGTGGTAGTGGAAAAAGCACTCTGGTGAACCTTCTCCTTCGGCTGTATGAGCCAATAAGTGGGCAG
ATATCTATTGATGGCTACCCGATTAGAGATTTGAACATCAAGTGGTTGAGGGAAAGAATTGGATATGTGGGACAGGAACCTAGACTTTTCCGCAT
GGATATCAGCTCAAACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259596] | SGN-U566990 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72357 [Download] [View] | Facility Assigned ID: TBFGL84TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
