EST details — SGN-E267040
| Search information |
| Request: 267040 | Match: SGN-E267040 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C48457 | Clone name: cLEI-4-K1 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C188834 [TUS-56-D16] | Trace: SGN-T338435 | EST: SGN-E537560 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C188834 [TUS-56-D16] | Trace: SGN-T348787 | EST: SGN-E547912 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E267040 | Length: 553 bp (746 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E267040 [] (trimmed)
GCTCTCTCGCTCATCGTCAGCCCGTGAAAATGTTCAAGAAGTTTTCAACTGAAGAAGTGTCTGGACAAAATCAAGTCAAGGCATCTGTGCAGCGT
AGAATTCGTCAAAGCATTGCAGAAGAGTACCCACTACTAGAGCCAGTGTTGGAAGATCTGCTTCCAAAGAAGTCTCCTCTCATTGTTGCAAAATG
TCAAAATCATCTGAATTTAGTTGTGGTAAACAATGTACCCCTGTTTTTCAACATACGTGATGGACCTTATATGCCTACTTTACGTCTTCTGCATC
AATATCCAAATATAATGAAAAAACTACAAGTTGACAGGGGCGCAATTAAATTTGTCCTCTCTGGAGCCAACATAATGTGTCCAGGTCTTACTTCT
CCTGGGGGTGCTTTGGATGTTGAAGTGGGGGCAGAAACTCCCGTGGCTATTATGGCTGAAGGGAAGCAACATGCTCTAGCTATTGGCTTTACAAA
GATGTCGGCAAAGGATATAAAGGCAATCAACAAAGGAATTGGTGTGGATAACATGCATTATCTTAATGATGGGCTCTG
AGAATTCGTCAAAGCATTGCAGAAGAGTACCCACTACTAGAGCCAGTGTTGGAAGATCTGCTTCCAAAGAAGTCTCCTCTCATTGTTGCAAAATG
TCAAAATCATCTGAATTTAGTTGTGGTAAACAATGTACCCCTGTTTTTCAACATACGTGATGGACCTTATATGCCTACTTTACGTCTTCTGCATC
AATATCCAAATATAATGAAAAAACTACAAGTTGACAGGGGCGCAATTAAATTTGTCCTCTCTGGAGCCAACATAATGTGTCCAGGTCTTACTTCT
CCTGGGGGTGCTTTGGATGTTGAAGTGGGGGCAGAAACTCCCGTGGCTATTATGGCTGAAGGGAAGCAACATGCTCTAGCTATTGGCTTTACAAA
GATGTCGGCAAAGGATATAAAGGCAATCAACAAAGGAATTGGTGTGGATAACATGCATTATCTTAATGATGGGCTCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E267040] | SGN-U583623 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T80187 [Download] [View] | Facility Assigned ID: TGSAM61TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |
Working
