EST details — SGN-E268429
| Search information |
| Request: 268429 | Match: SGN-E268429 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C46600 | Clone name: cLEI-13-B2 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177601 is on microarray TOM1: SGN-S1-1-2.4.6.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177601 [TUS-26-P15] | Trace: SGN-T182615 | EST: SGN-E370001 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177601 [TUS-26-P15] | Trace: SGN-T182616 | EST: SGN-E370002 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268429 | Length: 679 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268429 [] (trimmed)
AGAAATGGCTAATACCAAAGACTCATACCACATAATTACAATGGATACCAAAGAGTCTTCAATTCCAAGTCTTCCTATGAAAGAAATTCCTGGTG
ATTATGGTGTCCCATTCTTCGGGGCGATAAAAGATCGTTACGATTTTCATTACAATCAAGGTGCTGATGAATTTTTCAGGTCTCGCATGAAAAAG
TACGATTCCACTGTCTTTAGAACCAATGTCCCTCCTGGTCCTTTCAATGCTCGTAACTCTAAAGTTGTTGTCCTTGTAGACGCGGTTAGTTATCC
CATCCTTTTCGATAACTCCCAAGTCGACAAGGAAAACTACTTTGAAGGTACTTTTATGTCCTCTCCATCTTTCAATGGTGGTTATAAGGTTTGTG
GTTTTCTTGGTACTAGTGACCCTAAACACACCACTCTAAAAGGTCTTTTCTTGTCCACACTAACTAGATTGCATGACAAGTTCATCCCTATCTTT
ACTACATCAATCACTTCAATGTTTACCAGTCTTGAAAAAGAACTGTCTGAGAAAGGAACGTCTTACTTCAATCCCATCGGTGACAACTTGTCATT
CGAATTCCTCTTTCGATTGTTTTGTGAAGGGAAAAATCCAATTGATACAAGTGTTGGCCCTAATGGACCAAAAATTGTAGACAAATGGGTTTTTC
TTCAACTAGCTCCA
ATTATGGTGTCCCATTCTTCGGGGCGATAAAAGATCGTTACGATTTTCATTACAATCAAGGTGCTGATGAATTTTTCAGGTCTCGCATGAAAAAG
TACGATTCCACTGTCTTTAGAACCAATGTCCCTCCTGGTCCTTTCAATGCTCGTAACTCTAAAGTTGTTGTCCTTGTAGACGCGGTTAGTTATCC
CATCCTTTTCGATAACTCCCAAGTCGACAAGGAAAACTACTTTGAAGGTACTTTTATGTCCTCTCCATCTTTCAATGGTGGTTATAAGGTTTGTG
GTTTTCTTGGTACTAGTGACCCTAAACACACCACTCTAAAAGGTCTTTTCTTGTCCACACTAACTAGATTGCATGACAAGTTCATCCCTATCTTT
ACTACATCAATCACTTCAATGTTTACCAGTCTTGAAAAAGAACTGTCTGAGAAAGGAACGTCTTACTTCAATCCCATCGGTGACAACTTGTCATT
CGAATTCCTCTTTCGATTGTTTTGTGAAGGGAAAAATCCAATTGATACAAGTGTTGGCCCTAATGGACCAAAAATTGTAGACAAATGGGTTTTTC
TTCAACTAGCTCCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268429] | SGN-U566889 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82490 [Download] [View] | Facility Assigned ID: TGSBZ01TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |
Working
