EST details — SGN-E268507
| Search information |
| Request: 268507 | Match: SGN-E268507 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C46851 | Clone name: cLEI-13-O13 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177652 is on microarray TOM1: SGN-S1-1-7.2.6.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177652 [TUS-27-B18] | Trace: SGN-T193252 | EST: SGN-E391926 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177652 [TUS-27-B18] | Trace: SGN-T197832 | EST: SGN-E396506 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268507 | Length: 595 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268507 [] (trimmed)
GTTTCATATTGATGGTTTTGTTTTTGTTAACGCTTCGTCCTTGTTGAGAGGGTTCAATGGAGAGATTCTATCTCGTCCTCCATTAGTTGAAGCTA
TTGCCTTTGATCCTATCCTTTCAAAGGTCAAGATGATTGCAGATAATTGGAATCCATTAACCAATGATTCTACGGAAAATTTATTCCCTCACTGG
AGGAGATGGGCAGAGATAAATATGAGATTTTGTGATGACATTCGAGACTTCTTGAGAGGTGAGGGTCTTCTAAGCAATTTAGCAACACGACTTTG
TGGAAGTGGGGATATCTTCGCAGGTGGACGAGGCCCTGCATTCTCTTTCAATTATATCGCCAGAAATTCTGGACTTACACTTGTTGACCTGGTTA
GCTTCAGTAATAGTGAAGTGGCTTCAGAGTTAAGTTGGAATTGTGGACAAGAAGGCGCCACGACTAATAGTATTGTCCTAGAGAGACGACTTAAA
CAAGTTCGTAATTTTCTGTTCATATTGTTCATTTCTCTAGGTGTACCAGTACTTAACATGGGAGACGAGTGTGGTCAGTCTTCCAGAGGTTCCCC
AGCATATGATGCTCGAAAATCTTTG
TTGCCTTTGATCCTATCCTTTCAAAGGTCAAGATGATTGCAGATAATTGGAATCCATTAACCAATGATTCTACGGAAAATTTATTCCCTCACTGG
AGGAGATGGGCAGAGATAAATATGAGATTTTGTGATGACATTCGAGACTTCTTGAGAGGTGAGGGTCTTCTAAGCAATTTAGCAACACGACTTTG
TGGAAGTGGGGATATCTTCGCAGGTGGACGAGGCCCTGCATTCTCTTTCAATTATATCGCCAGAAATTCTGGACTTACACTTGTTGACCTGGTTA
GCTTCAGTAATAGTGAAGTGGCTTCAGAGTTAAGTTGGAATTGTGGACAAGAAGGCGCCACGACTAATAGTATTGTCCTAGAGAGACGACTTAAA
CAAGTTCGTAATTTTCTGTTCATATTGTTCATTTCTCTAGGTGTACCAGTACTTAACATGGGAGACGAGTGTGGTCAGTCTTCCAGAGGTTCCCC
AGCATATGATGCTCGAAAATCTTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268507] | SGN-U564514 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82568 [Download] [View] | Facility Assigned ID: TGSBW91TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |
Working
