EST details — SGN-E270381
Search information |
Request: 270381 | Match: SGN-E270381 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C62148 | Clone name: cLEM-1-J9 |
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Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177775 is on microarray TOM1: SGN-S1-1-4.3.6.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E270381 | Length: 638 bp (841 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E270381 [] (trimmed)
GGAGAAGTATGGGTGTGGACTATTACAAGGTTCTTCAGGTGGACCGAAATGCCAAAGATGATGACCTCAAAAAAGCCTATCGAAAACTCGCTATG
AAATGGCATCCTGATAAGAACCCTAACAACAAGAAAGAAGCTGAAGCCAAATTCAAACAAATCTCTGAAGCCTACGATGTTTTGAGTGATCCACA
GAAGAGAGTAGTGTATGATCAATACGGAGAAGAGGGGTTGAAAGGGCAGGTGCCACCTCCAGGTGCCGGTGGATTTTCTGGCCCTTCAGATGGGG
GTGGTCATGGGTCGTTTCGATTCAACCCCCGTAGTGCTGATGATATATTCTCCGAATTCTTTGGGTTTTCCACCCCGTATGGTGGGATGGGAGAT
ATGGGTGGACGGGCTGGTGGTCCAAGTTTCAGTAGAGGTATGTTTGGGGAAGATATTTTCACTTCATTCAGGAATGCTGCTGGCGAAGGTGCATC
AGGTAATGCTCCACGAAAGGCCGCTCCTATAGAGCGGGCACTTCCTTGTAGTTTGGAGGATCTATACAAGGGAACCACCAAGAAGATGAAGATAT
CCAGAGAAGTTACTGATGCTACTGGGAGACCCAGTACAACAGAGGAAATTCTAACGATTGATATCAAA
AAATGGCATCCTGATAAGAACCCTAACAACAAGAAAGAAGCTGAAGCCAAATTCAAACAAATCTCTGAAGCCTACGATGTTTTGAGTGATCCACA
GAAGAGAGTAGTGTATGATCAATACGGAGAAGAGGGGTTGAAAGGGCAGGTGCCACCTCCAGGTGCCGGTGGATTTTCTGGCCCTTCAGATGGGG
GTGGTCATGGGTCGTTTCGATTCAACCCCCGTAGTGCTGATGATATATTCTCCGAATTCTTTGGGTTTTCCACCCCGTATGGTGGGATGGGAGAT
ATGGGTGGACGGGCTGGTGGTCCAAGTTTCAGTAGAGGTATGTTTGGGGAAGATATTTTCACTTCATTCAGGAATGCTGCTGGCGAAGGTGCATC
AGGTAATGCTCCACGAAAGGCCGCTCCTATAGAGCGGGCACTTCCTTGTAGTTTGGAGGATCTATACAAGGGAACCACCAAGAAGATGAAGATAT
CCAGAGAAGTTACTGATGCTACTGGGAGACCCAGTACAACAGAGGAAATTCTAACGATTGATATCAAA
Unigenes |
Current Unigene builds | |||||
[SGN-E270381] | SGN-U569323 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T83754 [Download] [View] | Facility Assigned ID: TGFAC53TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.986 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |