EST details — SGN-E270438
| Search information |
| Request: 270438 | Match: SGN-E270438 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C62189 | Clone name: cLEM-1-M12 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189283 [TUS-57-G9] | Trace: SGN-T339171 | EST: SGN-E538296 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E270438 | Length: 342 bp (696 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270438 [] (trimmed)
ACTGGTGTGATCAAGCCTGGTATGGTTGTGACCTTTGGCCCTACTGGTTTGACAACTGAAGTCAAGTCTGTAGAGATGCACCACGAAGCTATCCA
GGAGGCACTCCCTGGTGACAATGTTGGGTTCAATGTTAAGAATGTTGCTGTTAAGGATCTTAAGCGTGGTTATGTTGCCTCAAACTCCAAGGATG
ACCCAGCCAAGGGGGCAGCCAGCTTCACTGCCCAGGTCATCATCATGAACCATCCTGGCCAGATTGGAAACGGATATGCCCCTGTGCTCGACTGT
CACACTTCACACATTGCTGTCAAGTTTGCTGAGATCTTGACCAAGATTGACAGGCGT
GGAGGCACTCCCTGGTGACAATGTTGGGTTCAATGTTAAGAATGTTGCTGTTAAGGATCTTAAGCGTGGTTATGTTGCCTCAAACTCCAAGGATG
ACCCAGCCAAGGGGGCAGCCAGCTTCACTGCCCAGGTCATCATCATGAACCATCCTGGCCAGATTGGAAACGGATATGCCCCTGTGCTCGACTGT
CACACTTCACACATTGCTGTCAAGTTTGCTGAGATCTTGACCAAGATTGACAGGCGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270438] | SGN-U580418 | Tomato 200607 | Build 2 | 320 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T83811 [Download] [View] | Facility Assigned ID: TGFAB78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.992 | Expected Error Rate: 0.0312 | Quality Trim Threshold: 14.5 |
Working
