Notice: Due to a regional power outage, SGN was briefly unavailable on Saturday, Feb 4. We apologize for the inconvenience.

EST details — SGN-E271777

Search information 
Request: 271777Match: SGN-E271777
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C65182Clone name: cLEM-8-I9
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C180930 is on microarray TOM1: SGN-S1-1-1.3.17.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180930 [TUS-35-K8] Trace: SGN-T193643 EST: SGN-E392317 Direction: 5' Facility: INRA
Clone: SGN-C180930 [TUS-35-K8] Trace: SGN-T193883 EST: SGN-E392557 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E271777Length: 633 bp (832 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271777 [] (trimmed) GGAAGCTGCTAACGTTGACAATCTACTGACTACGTTCCTCAAAAGTGGCGTTATCCCTAGTGAGATTGGAGTTATAACACCATATGAGGGTCAAC
GAGCATATATTGTAAATTATATGTCTAGAAATGGTGCTTTAAGGCAGCAACTTTACAAGGAAATTGAGGTTGCAAGTGTAGATTCATTTCAAGGA
AGAGAAAAAGATTATATCATCTTGTCTTGTGTCAGGAGCAATGAACATCAGGGCATTGGGTTTCTGAATGATCCTCGCAGGCTTAATGTTGCTCT
TACACGTGCTCGTTATGGAATCGTTATCCTAGGAAATCCTAAAGTGTTGAGCAAGCAGCCTCTCTGGAATGGGTTGCTGACACACTACAAGGAGC
ATGAATGCTTGGTAGAAGGTCCTTTAAATAACTTAAAGCAAAGTATGGTACAGTTTCAGAAGCCAAAAAAGATCTACAATGACCGCAGGCTTTTC
TTTGGTGGTGGACCTGGAATTGTTCCCAGTGATAATTATGGATCTCCTGCCTCATCAAACCCCAATGCTGACAGGCGAAGTAGTCGCTCTAGGGG
TTCTTACATGGCACCTCGTCCATCCAATGGTACTCACAGACCTGGTGTCTATCCTTCTGGTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271777] SGN-U577375 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85328 [Download] [View] Facility Assigned ID: TGFBC53TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0111 Quality Trim Threshold: 14.5