EST details — SGN-E271777
| Search information |
| Request: 271777 | Match: SGN-E271777 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C65182 | Clone name: cLEM-8-I9 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180930 is on microarray TOM1: SGN-S1-1-1.3.17.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180930 [TUS-35-K8] | Trace: SGN-T193643 | EST: SGN-E392317 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180930 [TUS-35-K8] | Trace: SGN-T193883 | EST: SGN-E392557 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271777 | Length: 633 bp (832 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271777 [] (trimmed)
GGAAGCTGCTAACGTTGACAATCTACTGACTACGTTCCTCAAAAGTGGCGTTATCCCTAGTGAGATTGGAGTTATAACACCATATGAGGGTCAAC
GAGCATATATTGTAAATTATATGTCTAGAAATGGTGCTTTAAGGCAGCAACTTTACAAGGAAATTGAGGTTGCAAGTGTAGATTCATTTCAAGGA
AGAGAAAAAGATTATATCATCTTGTCTTGTGTCAGGAGCAATGAACATCAGGGCATTGGGTTTCTGAATGATCCTCGCAGGCTTAATGTTGCTCT
TACACGTGCTCGTTATGGAATCGTTATCCTAGGAAATCCTAAAGTGTTGAGCAAGCAGCCTCTCTGGAATGGGTTGCTGACACACTACAAGGAGC
ATGAATGCTTGGTAGAAGGTCCTTTAAATAACTTAAAGCAAAGTATGGTACAGTTTCAGAAGCCAAAAAAGATCTACAATGACCGCAGGCTTTTC
TTTGGTGGTGGACCTGGAATTGTTCCCAGTGATAATTATGGATCTCCTGCCTCATCAAACCCCAATGCTGACAGGCGAAGTAGTCGCTCTAGGGG
TTCTTACATGGCACCTCGTCCATCCAATGGTACTCACAGACCTGGTGTCTATCCTTCTGGTTA
GAGCATATATTGTAAATTATATGTCTAGAAATGGTGCTTTAAGGCAGCAACTTTACAAGGAAATTGAGGTTGCAAGTGTAGATTCATTTCAAGGA
AGAGAAAAAGATTATATCATCTTGTCTTGTGTCAGGAGCAATGAACATCAGGGCATTGGGTTTCTGAATGATCCTCGCAGGCTTAATGTTGCTCT
TACACGTGCTCGTTATGGAATCGTTATCCTAGGAAATCCTAAAGTGTTGAGCAAGCAGCCTCTCTGGAATGGGTTGCTGACACACTACAAGGAGC
ATGAATGCTTGGTAGAAGGTCCTTTAAATAACTTAAAGCAAAGTATGGTACAGTTTCAGAAGCCAAAAAAGATCTACAATGACCGCAGGCTTTTC
TTTGGTGGTGGACCTGGAATTGTTCCCAGTGATAATTATGGATCTCCTGCCTCATCAAACCCCAATGCTGACAGGCGAAGTAGTCGCTCTAGGGG
TTCTTACATGGCACCTCGTCCATCCAATGGTACTCACAGACCTGGTGTCTATCCTTCTGGTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271777] | SGN-U577375 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85328 [Download] [View] | Facility Assigned ID: TGFBC53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.985 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 14.5 |
Working
