EST details — SGN-E277448
| Search information |
| Request: 277448 | Match: SGN-E277448 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C73249 | Clone name: cLER-3-P1 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189686 [TUS-58-H4] | Trace: SGN-T339816 | EST: SGN-E538941 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189686 [TUS-58-H4] | Trace: SGN-T339818 | EST: SGN-E538943 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E277448 | Length: 263 bp (764 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E277448 [] (trimmed)
AGAGTTAGCTGCTTGCATGTGTGGCCACCAATCAACATGAATAAGGACCAGACACTCTCATACCTTCCTGCTTAGGCTGACTAGCAATTGCATAT
TGAAATTGAGTCCCTTTTGAAAAATGGATAGGGTTTCTTGCTTGGAATTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCA
GGATACTATGATGGAAGGTACTGGACCATGTGGAAAATGCCTATGTTTGGGGGCACTGATGCAACCGAAGTGT
TGAAATTGAGTCCCTTTTGAAAAATGGATAGGGTTTCTTGCTTGGAATTTGAGACTGAGCACGGATTTGTCTACCGTGAGAACAACAAGTCACCA
GGATACTATGATGGAAGGTACTGGACCATGTGGAAAATGCCTATGTTTGGGGGCACTGATGCAACCGAAGTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E277448] | SGN-U591303 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92336 [Download] [View] | Facility Assigned ID: TPRAK85THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0333 | Quality Trim Threshold: 12.5 |
Working
