EST details — SGN-E278225
Search information |
Request: 278225 | Match: SGN-E278225 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C74446 | Clone name: cLER-9-I17 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C189822 [TUS-58-M20] | Trace: SGN-T340052 | EST: SGN-E539177 | Direction: 5' | Facility: INRA (MWG) |
Clone: SGN-C189822 [TUS-58-M20] | Trace: SGN-T349052 | EST: SGN-E548177 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E278225 | Length: 433 bp (750 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E278225 [] (trimmed)
GTTCTTGTTCCAGACACGACTACCATGGTTATTATGCTGCCAATTTGTGCAGCAGCAGAAGAAGTGGAATTTGGGAAGATTATTCATGATTTAGC
TGTAAAGCTAGGATTATCTGACGAGTTAACAGTGAATAATTCTTTAGTGGATATGTATTGCAAAGTTGGATACCTTTCTGATGCACAAATTCTGT
TTGAGAAAAATGAGAGCAAAAGTGCGGTCTCTTGGAACTCCATTATCGGGGGTTATTCAAGAGAAGGAGATGATAGAGGAACATTTCATCTTATG
AGAAGGATGCAAAGTACTGAGGAGTACATGAAGGCGAATGAGGTTACTCTACTGAATGTTTTGTCCGTTTGCCTAGAGGAGTCAGAGCAGTTGAT
AGTGAAAGAACTGCATGGCTACTCACTTAGAAATGGTCTTGAATACCATGAGT
TGTAAAGCTAGGATTATCTGACGAGTTAACAGTGAATAATTCTTTAGTGGATATGTATTGCAAAGTTGGATACCTTTCTGATGCACAAATTCTGT
TTGAGAAAAATGAGAGCAAAAGTGCGGTCTCTTGGAACTCCATTATCGGGGGTTATTCAAGAGAAGGAGATGATAGAGGAACATTTCATCTTATG
AGAAGGATGCAAAGTACTGAGGAGTACATGAAGGCGAATGAGGTTACTCTACTGAATGTTTTGTCCGTTTGCCTAGAGGAGTCAGAGCAGTTGAT
AGTGAAAGAACTGCATGGCTACTCACTTAGAAATGGTCTTGAATACCATGAGT
Unigenes |
Current Unigene builds | |||||
[SGN-E278225] | SGN-U604389 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T93959 [Download] [View] | Facility Assigned ID: TPRBG57TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.957 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 14.5 |