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EST details — SGN-E279432

Search information 
Request: 279432Match: SGN-E279432
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C69529Clone name: cLER-11-D13
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C184377 is on microarray TOM1: SGN-S1-1-2.2.16.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184377 [TUS-44-J23] Trace: SGN-T198306 EST: SGN-E396980 Direction: 3' Facility: INRA
Clone: SGN-C184377 [TUS-44-J23] Trace: SGN-T198307 EST: SGN-E396981 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E279432Length: 661 bp (852 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E279432 [] (trimmed) GAAAGTCAGTTTCCCCTAATGTGCAGACGTATAACATCTTAATTGACGGATATGGGCGCAAGCAGGAATTCGTGAGGTGTTTTGAGATTCTCGAG
GAGATGGAAAATAACGGATTGAATCCTAATGTAATTACCTATGGTTCTCTAATCAATTCTTTGTGCAAGGATGGTAGGCTTCTTGAAGCTGATGT
AGTCCTAAGTGATATGATCAGTAGAGGGGTTAAACCAAATGCGCAGGTCTATAATATGCTTATAGATGGACATTGTATGAGAGGAAGGATGACTG
ATGCTTTTAGATGCTTGGAGAAGATGCTACAAAGTGATGCGGAAACAACACTCGTTACATACAATACTCTATTAAATGGGCTTTGCAAAAAGGGT
AAGACCAAAGAAGCTGAGGAGTTGGTCGCGGATATTCAACTCAAAGGTTTCGTTCCAGATGTTATCACATACAATTCTTTAATCTCTGCGTATTC
AGATGCACGGGACAGTGAAAAGTGTTATGAAATGTATGAGAAGATGAAAACCTCTGGCATAAAACCTACAATCAACACAATTCATCCTCTAATTA
GAGTGTCCAAAGAGGGAAAGAATGGACTGGTGTCAATTGACAAAATTGTTGAAGAAATGTCCCAGATGGATCTTTCTCCTGACCGAGTTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E279432] SGN-U565151 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T94184 [Download] [View] Facility Assigned ID: TPRBQ19TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5